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基于计算机辅助方法研制针对中枢神经系统结核的新型多表位 mRNA 疫苗

Development of innovative multi-epitope mRNA vaccine against central nervous system tuberculosis using in silico approaches.

机构信息

State Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.

Reproductive Medicine Center, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.

出版信息

PLoS One. 2024 Sep 6;19(9):e0307877. doi: 10.1371/journal.pone.0307877. eCollection 2024.

Abstract

Tuberculosis(TB) of the Central nervous system (CNS) is a rare and highly destructive disease. The emergence of drug resistance has increased treatment difficulty, leaving the Bacillus Calmette-Guérin (BCG) vaccine as the only licensed preventative immunization available. This study focused on identifying the epitopes of PknD (Rv0931c) and Rv0986 from Mycobacterium tuberculosis(Mtb) strain H37Rv using an in silico method. The goal was to develop a therapeutic mRNA vaccine for preventing CNS TB. The vaccine was designed to be non-allergenic, non-toxic, and highly antigenic. Codon optimization was performed to ensure effective translation in the human host. Additionally, the secondary and tertiary structures of the vaccine were predicted, and molecular docking with TLR-4 was carried out. A molecular dynamics simulation confirmed the stability of the complex. The results indicate that the vaccine structure shows effectiveness. Overall, the constructed vaccine exhibits ideal physicochemical properties, immune response, and stability, laying a theoretical foundation for future laboratory experiments.

摘要

中枢神经系统(CNS)结核(TB)是一种罕见且极具破坏性的疾病。耐药性的出现增加了治疗的难度,使得卡介苗(BCG)疫苗成为唯一获得许可的预防免疫接种。本研究采用计算机模拟方法,聚焦于鉴定结核分枝杆菌(Mtb)H37Rv 株 PknD(Rv0931c)和 Rv0986 的表位,旨在开发一种用于预防 CNS TB 的治疗性 mRNA 疫苗。该疫苗被设计为非变应原性、非毒性和高抗原性。进行密码子优化以确保在人类宿主中有效翻译。此外,还预测了疫苗的二级和三级结构,并进行了与 TLR-4 的分子对接。分子动力学模拟证实了复合物的稳定性。结果表明,疫苗结构显示出有效性。总体而言,构建的疫苗表现出理想的理化特性、免疫反应和稳定性,为未来的实验室实验奠定了理论基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/84b0/11379207/adb9ad398616/pone.0307877.g001.jpg

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