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Metagenomic next-generation sequencing contributes to the diagnosis of mixed pulmonary infection: a case report.宏基因组下一代测序有助于混合性肺部感染的诊断:一例报告。
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Prevalence of Fungal and Bacterial Co-Infection in Pulmonary Fungal Infections: A Metagenomic Next Generation Sequencing-Based Study.肺部真菌感染中真菌和细菌合并感染的流行情况:基于宏基因组下一代测序的研究。
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Exploring the Clinical Utility of Metagenomic Next-Generation Sequencing in the Diagnosis of Pulmonary Infection.探索宏基因组下一代测序在肺部感染诊断中的临床应用价值。
Infect Dis Ther. 2021 Sep;10(3):1419-1435. doi: 10.1007/s40121-021-00476-w. Epub 2021 Jun 12.
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A variety of bacterial aetiologies in the lower respiratory tract at patients with endobronchial tuberculosis.支气管内膜结核患者下呼吸道的多种细菌病因。
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Gram-negative bacilli are a major cause of secondary pneumonia in patients with pulmonary tuberculosis: evidence from a cross-sectional study in a tertiary hospital in Nigeria.革兰氏阴性杆菌是肺结核患者继发性肺炎的主要病因:来自尼日利亚一家三级医院的横断面研究证据。
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来自三级医疗中心的微生物学确诊肺结核患者中经培养证实的细菌病原体合并感染的患病率。

Prevalence of Co-infection of Culture-Proven Bacterial Pathogens in Microbiologically Confirmed Pulmonary Tuberculosis Patients From a Tertiary Care Center.

作者信息

Bir Raunak, Ranjan Rahul, Gunasekaran Jayanthi, Chatterjee Kuhu, Karteeka Dr, Rai Ankita, Gupta Sonam, Karlapudi Priya, Joshi Ina, Gupta Rajiv M

机构信息

Department of Microbiology, ESIC (Employees' State Insurance Corporation) Medical College and Hospital, Faridabad, IND.

出版信息

Cureus. 2024 Aug 8;16(8):e66482. doi: 10.7759/cureus.66482. eCollection 2024 Aug.

DOI:10.7759/cureus.66482
PMID:39247035
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11380723/
Abstract

Tuberculosis (TB) is a chronic condition that weakens the immune system, causes structural changes in the lungs, and can lead to infections by other bacterial pathogens. Very few studies have been done to understand the magnitude of co-infection with other bacterial pathogens, so this study was conducted to understand the co-infection pattern and burden. A total of 174 microbiologically confirmed pulmonary TB patients' samples, identified by cartridge-based nucleic acid amplification test, were further tested for other bacterial pathogens by culture over a period of five months from May 2023 to September 2023. The isolates' identification and drug susceptibility were performed using the VITEK 2 system (bioMérieux, Marcy-l'Étoile, France). Of the 174 pulmonary samples tested, 19 samples grew a significant amount of other bacterial pathogens, making the prevalence 10.91% (19/174). Among the pulmonary samples tested, 54.59% were sputum, 38.5% were bronchoalveolar lavage, and 6.89% were endotracheal aspirate. Additionally, 70.11% of the patients tested were in the age group of 19-60 years. Of the patients who had co-infection, 94.73% (18/19) were male. The most common bacterial infection was caused by , which was identified in 36.84% of the co-infection cases (7/19). This was followed by in 31.57% (6/19), in 26.31% (5/19), and in 5.28% (1/19). and showed high drug resistance, ranging from 60% to 100% against various groups of drugs tested. None of the patient samples with co-infection showed rifampicin resistance. Among all the samples with co-infection, the majority (42.10%, or 8/19) had a high load of complex detected by CBNAAT Ultra (Cepheid, Sunnyvale, California). , , and are unusual pathogens causing infection in community patients and are known to cause illness in hospitalized patients. These organisms' resistance was also similar to the resistance shown by hospital-acquired infections. This indicates that bacterial co-infection in pulmonary TB patients will be similar to the pattern of hospital-acquired infections. The high prevalence of bacterial co-infections (10.91%) in patients with pulmonary TB poses a significant challenge as these bacterial pathogens are not susceptible to anti-tubercular drugs. Therefore, comprehensive screening for other bacterial infections in all pulmonary TB patients is crucial for effective treatment and outcomes.

摘要

结核病(TB)是一种慢性疾病,会削弱免疫系统,导致肺部结构改变,并可能引发其他细菌病原体感染。目前针对与其他细菌病原体合并感染的严重程度所开展的研究极少,因此开展本研究以了解合并感染模式及负担情况。2023年5月至2023年9月的五个月期间,对通过基于试剂盒的核酸扩增试验鉴定出的174例微生物学确诊的肺结核患者样本,进一步进行其他细菌病原体的培养检测。使用VITEK 2系统(法国马赛 - 埃托瓦勒生物梅里埃公司)进行菌株鉴定和药敏试验。在检测的174份肺部样本中,有19份样本培养出大量其他细菌病原体,患病率为10.91%(19/174)。在检测的肺部样本中,54.59%为痰液样本,38.5%为支气管肺泡灌洗样本,6.89%为气管内吸出物样本。此外,70.11%的受测患者年龄在19至60岁之间。在合并感染的患者中,94.73%(18/19)为男性。最常见的细菌感染是由 引起的,在36.84%的合并感染病例(7/19)中被鉴定出来。其次是 在31.57%(6/19)的病例中, 在26.31%(5/19)的病例中,以及 在5.28%(1/19)的病例中。 和 显示出较高的耐药性,对各类测试药物的耐药率在60%至100%之间。合并感染的患者样本中无一例显示对利福平耐药。在所有合并感染的样本中,大多数(42.10%,即8/19)通过CBNAAT Ultra(美国加利福尼亚州森尼韦尔市塞菲德公司)检测出 复合体的高载量。 、 和 是在社区患者中引起感染的不常见病原体,并且已知会在住院患者中引发疾病。这些病原体的耐药性也与医院获得性感染所显示的耐药性相似。这表明肺结核患者中的细菌合并感染模式将与医院获得性感染模式相似。肺结核患者中细菌合并感染的高患病率(10.91%)构成了重大挑战,因为这些细菌病原体对抗结核药物不敏感。因此,对所有肺结核患者进行其他细菌感染的全面筛查对于有效治疗和预后至关重要。