Chandra Tilak, Sahu Jagajjit, Jaiswal Sarika, Iquebal Mir Asif, Kumar Dinesh
Division for Agricultural Bioinformatics, ICAR-Indian Agricultural Statistics Research Institute, New Delhi, 110012, India.
Heliyon. 2024 Aug 15;10(16):e36375. doi: 10.1016/j.heliyon.2024.e36375. eCollection 2024 Aug 30.
Wheat, a highly versatile staple crop cultivated extensively for its grains on a global scale, is poised to experience increased demand to sustain the burgeoning population, owing to its superior nutritional potential. Modern wheat, a hexaploid species, has evolved through the introgression of numerous preceding ploidies, including Einkorn, Emmer, Aegilops, and others, each possessing distinct qualitative and quantitative traits. Scientometric and topical analyses serve as effective tools to quantitatively evaluate scientific research by measuring the knowledge expressed in scientific publications and keywords. Thus, comprehending the research status regarding wheat domestication events within primary, secondary, and tertiary gene pools is paramount for enhancing wheat production. In this study, we analyze data retrieved from PubMed to elucidate the research status and identify bottlenecks across different ploidy of genomic pools of wheat. The publication trends on wheat have experienced exponential growth over the past three decades, with China emerging as a leading center for publications. In contrast to the publication frequency observed in hexaploid common wheat, scholarly output concerning Einkorn and Aegilops is approximately tenfold lesser, with emmer trailing behind at three times fewer publications. This discrepancy underscores the prioritization of expedited research initiatives targeting these species, aimed at elucidating latent biological characteristics and optimizing their breeding capabilities. Keywords such as "stress," "GWAS," and "gene" are prominent, reflecting the challenges posed by climatic factors on wheat production and their mitigation through molecular breeding and gene manipulation. Notably, the keyword "einkorn" highlights its potential as a donor for fine-tuning traits related to wheat adaptation processes and quality, crucial for modern wheat's survivability under adverse climates. Conversely, higher publication rates on emmer are primarily associated with Italy, possibly due to its favorable Mediterranean climate for tetraploid wheat. Keywords like "Pasta" and "Ochratoxin, DON" are prevalent, with the former being derived from durum wheat and the latter being reported in higher amounts in durum compared to other wheat species, rendering it less suitable for consumption. Enriched keywords such as "genome" and "resistance" underscore the critical characteristics of Aegilops. Other significant keywords like "Aceria tosichella" possibly indicate multiple stages of resistance conferred by Aegilops, while the presence of the grain softness protein "puroindoline" enhances its acceptability for donation by Aegilops. Spelt, a close relative of common wheat, exhibits a research trend with thousands of annual publications and enriched keywords such as "stress" and "yield" reflect the current scientific emphasis on wheat research. Furthermore, hierarchical keywords like "bio-control" and "celiac disease" merit consideration for future research on hexaploid wheat.
小麦是一种用途广泛的主要作物,因其谷物而在全球范围内广泛种植。由于其卓越的营养潜力,随着人口的不断增长,对小麦的需求预计将会增加。现代小麦是一种六倍体物种,它是通过许多先前的倍体(包括一粒小麦、二粒小麦、节节麦等)的基因渗入而进化而来的,每个先前的倍体都具有独特的质量和数量性状。科学计量分析和主题分析是通过衡量科学出版物和关键词中表达的知识来定量评估科学研究的有效工具。因此,了解小麦在初级、次级和三级基因库中的驯化事件的研究现状对于提高小麦产量至关重要。在本研究中,我们分析了从PubMed检索到的数据,以阐明研究现状,并确定小麦基因组库不同倍体中的瓶颈。在过去三十年中,关于小麦的出版物趋势呈指数增长,中国已成为主要的出版物中心。与六倍体普通小麦的发表频率相比,关于一粒小麦和节节麦的学术产出大约少了十倍,二粒小麦的发表量则少了三倍。这种差异凸显了针对这些物种加快研究计划的优先级,旨在阐明潜在的生物学特性并优化其育种能力。“胁迫”“全基因组关联研究(GWAS)”和“基因”等关键词很突出,反映了气候因素对小麦生产带来的挑战以及通过分子育种和基因操作来缓解这些挑战的情况。值得注意的是,“一粒小麦”这个关键词凸显了其作为微调与小麦适应过程和品质相关性状的供体的潜力,这对于现代小麦在不利气候下的生存能力至关重要。相反,二粒小麦的较高发表率主要与意大利相关,这可能是因为其地中海气候有利于四倍体小麦生长。“意大利面”和“赭曲霉毒素、脱氧雪腐镰刀菌烯醇”等关键词很普遍,前者源自硬粒小麦,后者在硬粒小麦中的含量高于其他小麦品种,这使得硬粒小麦不太适合食用。诸如“基因组”和“抗性”等丰富的关键词突出了节节麦的关键特征。其他重要关键词如“小麦瘿螨”可能表明节节麦具有多个抗性阶段,而谷物软质蛋白“麦醇溶蛋白”的存在提高了节节麦作为供体的可接受性。斯佩尔特小麦是普通小麦的近亲,其研究趋势是每年有数千篇出版物,诸如“胁迫”和“产量”等丰富的关键词反映了当前小麦研究的科学重点。此外,像“生物防治”和“乳糜泻”这样的分层关键词值得在未来的六倍体小麦研究中加以考虑。