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Commentary: The International Mouse Phenotyping Consortium: high-throughput in vivo functional annotation of the mammalian genome.评论:国际小鼠表型分析联盟:哺乳动物基因组的高通量体内功能注释。
Mamm Genome. 2024 Dec;35(4):537-543. doi: 10.1007/s00335-024-10068-x. Epub 2024 Sep 10.
2
Multivariate phenotype analysis enables genome-wide inference of mammalian gene function.多变量表型分析使哺乳动物基因功能的全基因组推断成为可能。
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The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.国际小鼠表型分析联盟网站门户,是用于获取基因敲除小鼠及其相关表型数据的统一入口。
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The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease.国际小鼠表型分析联盟:全面的基因敲除表型分析为人类疾病研究提供支撑。
Nucleic Acids Res. 2023 Jan 6;51(D1):D1038-D1045. doi: 10.1093/nar/gkac972.
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Genome-wide screening reveals the genetic basis of mammalian embryonic eye development.全基因组筛查揭示了哺乳动物胚胎眼睛发育的遗传基础。
BMC Biol. 2023 Feb 3;21(1):22. doi: 10.1186/s12915-022-01475-0.
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Expanding the mammalian phenotype ontology to support automated exchange of high throughput mouse phenotyping data generated by large-scale mouse knockout screens.扩展哺乳动物表型本体论以支持大规模小鼠基因敲除筛选产生的高通量小鼠表型数据的自动交换。
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Pleiotropy data resource as a primer for investigating co-morbidities/multi-morbidities and their role in disease.多效性数据资源作为研究共病/多疾病及其在疾病中的作用的入门指南。
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The International Mouse Phenotyping Consortium (IMPC): a functional catalogue of the mammalian genome that informs conservation.国际小鼠表型分析联盟(IMPC):一份为保护工作提供信息的哺乳动物基因组功能目录。
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New models for human disease from the International Mouse Phenotyping Consortium.国际小鼠表型分析联盟构建人类疾病的新模型。
Mamm Genome. 2019 Jun;30(5-6):143-150. doi: 10.1007/s00335-019-09804-5. Epub 2019 May 24.

本文引用的文献

1
Extensive identification of genes involved in congenital and structural heart disorders and cardiomyopathy.对涉及先天性和结构性心脏疾病以及心肌病的基因进行广泛鉴定。
Nat Cardiovasc Res. 2022 Feb;1(2):157-173. doi: 10.1038/s44161-022-00018-8. Epub 2022 Feb 17.
2
Computational identification of disease models through cross-species phenotype comparison.通过跨物种表型比较计算识别疾病模型。
Dis Model Mech. 2024 Jun 1;17(6). doi: 10.1242/dmm.050604. Epub 2024 Jul 1.
3
INFRAFRONTIER: mouse model resources for modelling human diseases.前沿之下:用于模拟人类疾病的小鼠模型资源。
Mamm Genome. 2023 Sep;34(3):408-417. doi: 10.1007/s00335-023-10010-7. Epub 2023 Jul 19.
4
Genome-wide screening reveals the genetic basis of mammalian embryonic eye development.全基因组筛查揭示了哺乳动物胚胎眼睛发育的遗传基础。
BMC Biol. 2023 Feb 3;21(1):22. doi: 10.1186/s12915-022-01475-0.
5
Analysis of genome-wide knockout mouse database identifies candidate ciliopathy genes.全基因组敲除小鼠数据库分析鉴定潜在的纤毛病候选基因。
Sci Rep. 2022 Dec 1;12(1):20791. doi: 10.1038/s41598-022-19710-7.
6
The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease.国际小鼠表型分析联盟:全面的基因敲除表型分析为人类疾病研究提供支撑。
Nucleic Acids Res. 2023 Jan 6;51(D1):D1038-D1045. doi: 10.1093/nar/gkac972.
7
Mendelian gene identification through mouse embryo viability screening.通过小鼠胚胎存活筛选进行孟德尔基因鉴定。
Genome Med. 2022 Oct 13;14(1):119. doi: 10.1186/s13073-022-01118-7.
8
Identifying genetic determinants of inflammatory pain in mice using a large-scale gene-targeted screen.利用大规模基因靶向筛选技术鉴定小鼠炎症性疼痛的遗传决定因素。
Pain. 2022 Jun 1;163(6):1139-1157. doi: 10.1097/j.pain.0000000000002481. Epub 2021 Sep 13.
9
Progress towards completing the mutant mouse null resource.完成突变小鼠缺失资源的进展。
Mamm Genome. 2022 Mar;33(1):123-134. doi: 10.1007/s00335-021-09905-0. Epub 2021 Oct 26.
10
Pleiotropy data resource as a primer for investigating co-morbidities/multi-morbidities and their role in disease.多效性数据资源作为研究共病/多疾病及其在疾病中的作用的入门指南。
Mamm Genome. 2022 Mar;33(1):135-142. doi: 10.1007/s00335-021-09917-w. Epub 2021 Sep 15.

评论:国际小鼠表型分析联盟:哺乳动物基因组的高通量体内功能注释。

Commentary: The International Mouse Phenotyping Consortium: high-throughput in vivo functional annotation of the mammalian genome.

机构信息

Department of Surgery, School of Medicine, University of California, Davis, California, USA.

Mouse Biology Program, University of California, Davis, California, USA.

出版信息

Mamm Genome. 2024 Dec;35(4):537-543. doi: 10.1007/s00335-024-10068-x. Epub 2024 Sep 10.

DOI:10.1007/s00335-024-10068-x
PMID:39254744
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11522054/
Abstract

The International Mouse Phenotyping Consortium (IMPC) is a worldwide effort producing and phenotyping knockout mouse lines to expose the pathophysiological roles of all genes in human diseases and make mice and data available and accessible to the global research community. It has created new knowledge on the function of thousands of genes for which little to anything was known. This new knowledge has informed the genetic basis of rare diseases, posited gene product influences on common diseases, influenced research on targeted therapies, revealed functional pleiotropy, essentiality, and sexual dimorphism, and many more insights into the role of genes in health and disease. Its scientific contributions have been many and widespread, however there remain thousands of "dark" genes yet to be illuminated. Nearing the end of its current funding cycle, IMPC is at a crossroads. The vision forward is clear, the path to proceed less so.

摘要

国际小鼠表型分析联盟(IMPC)是一个全球性的努力,旨在生产和表型分析敲除小鼠品系,以揭示所有人类疾病相关基因的病理生理作用,并使小鼠和数据可供全球研究界使用和访问。它为数千个以前知之甚少的基因的功能创造了新的知识。这些新知识阐明了罕见疾病的遗传基础,提出了基因产物对常见疾病的影响,影响了靶向治疗的研究,揭示了功能多效性、必需性和性别二态性,以及更多关于基因在健康和疾病中的作用的见解。它的科学贡献是多方面的,然而,仍有成千上万的“暗”基因有待阐明。在当前资助周期接近尾声之际,IMPC 正处于十字路口。未来的愿景很明确,但前进的道路却不那么清晰。