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林奇综合征相关的基因组变异。

Lynch Syndrome-associated Genomic Variants.

机构信息

Dept. of Obstetrics and Gynecology, Carol Davila University of Medicine and Pharmacy, Bucharest; Dept. of Obstetrics and Gynecology, Alessandrescu-Rusescu National Institute of Mother and Child Health, Bucharest, Romania.

Dept. of Pathology, Carol Davila University of Medicine and Pharmacy, Bucharest; Dept. of Pathology, Alessandrescu-Rusescu National Institute of Mother and Child Health, Bucharest, Romania.

出版信息

J Gastrointestin Liver Dis. 2024 Sep 29;33(3):339-347. doi: 10.15403/jgld-5856.

DOI:10.15403/jgld-5856
PMID:39255351
Abstract

BACKGROUND AND AIMS

Lynch Syndrome, a hereditary disorder characterized by germline mutations in mismatch repair (MMR) genes, is a major contributor to colorectal cancers. It has also been identified in endometrial cancer. Despite the established role of MMR deficiency in tumorigenesis, the specific genomic alterations driving Lynch syndrome-associated endometrial cancer, and their overlap with colorectal cancer, remain incompletely understood. This study aims to fill this gap by performing a detailed comparative analysis of germline and somatic mutations in endometrial cancer within the context of Lynch syndrome.

METHODS

We conducted whole exome sequencing on matched germline and somatic DNA from 13 patients diagnosed with Lynch syndrome-associated endometrial cancer. High-depth sequencing was performed, followed by rigorous bioinformatics analysis to identify and annotate variants, focusing on their potential pathogenicity and relevance to both endometrial and colorectal cancer.

RESULTS

Our analysis revealed 1,118 germline and 14,051 somatic variants, with 493 variants common to both. Recurrent pathogenic mutations in MLH1, MSH2, and MSH6 were confirmed, highlighting their critical role in Lynch syndrome. Notably, frequent somatic mutations in the PIK3CA and PTEN genes were identified, implicating the PI3K/AKT/mTOR pathway as a key oncogenic driver in these cancers. Additionally, novel somatic mutations in genes related to the extracellular matrix such as FBN1 and SPARC were uncovered, suggesting a possible unique role in endometrial tumor progression.

CONCLUSIONS

This study provides new insights into the molecular basis of Lynch syndrome-associated endometrial cancer, emphasizing the overlap in oncogenic pathways with colorectal cancer. The discovery of shared and unique genetic mutations highlights the importance of developing combined treatment strategies and suggests that targeting these specific mutations could improve therapy for patients with Lynch syndrome-associated cancers.

摘要

背景与目的

林奇综合征(Lynch syndrome)是一种遗传性疾病,其特征为错配修复(MMR)基因的种系突变,是结直肠癌的主要致病因素。它也存在于子宫内膜癌中。尽管 MMR 缺陷在肿瘤发生中具有重要作用,但导致林奇综合征相关子宫内膜癌的特定基因组改变及其与结直肠癌的重叠仍不完全清楚。本研究旨在通过在林奇综合征背景下对子宫内膜癌的种系和体细胞突变进行详细比较分析来填补这一空白。

方法

我们对 13 例诊断为林奇综合征相关子宫内膜癌的患者的匹配种系和体细胞 DNA 进行了全外显子组测序。进行了深度测序,然后进行了严格的生物信息学分析,以鉴定和注释变体,重点关注其潜在的致病性和与子宫内膜癌和结直肠癌的相关性。

结果

我们的分析揭示了 1118 种种系和 14051 种体细胞变体,其中 493 种变体在两者中均存在。证实了 MLH1、MSH2 和 MSH6 中反复出现的致病性突变,突出了它们在林奇综合征中的关键作用。值得注意的是,PI3K/AKT/mTOR 通路中的 PIK3CA 和 PTEN 基因频繁发生体细胞突变,表明其是这些癌症的关键致癌驱动因素。此外,还发现了与细胞外基质相关的基因如 FBN1 和 SPARC 的新的体细胞突变,表明其在子宫内膜肿瘤进展中可能具有独特作用。

结论

本研究为林奇综合征相关子宫内膜癌的分子基础提供了新的见解,强调了与结直肠癌中致癌途径的重叠。共享和独特遗传突变的发现强调了开发联合治疗策略的重要性,并表明针对这些特定突变可能会改善林奇综合征相关癌症患者的治疗效果。

相似文献

1
Lynch Syndrome-associated Genomic Variants.林奇综合征相关的基因组变异。
J Gastrointestin Liver Dis. 2024 Sep 29;33(3):339-347. doi: 10.15403/jgld-5856.
2
Colon and endometrial cancers with mismatch repair deficiency can arise from somatic, rather than germline, mutations.错配修复缺陷的结肠癌和子宫内膜癌可能源于体细胞突变,而非种系突变。
Gastroenterology. 2014 Dec;147(6):1308-1316.e1. doi: 10.1053/j.gastro.2014.08.041. Epub 2014 Sep 3.
3
Association of Mismatch Repair Mutation With Age at Cancer Onset in Lynch Syndrome: Implications for Stratified Surveillance Strategies.错配修复基因突变与林奇综合征发病年龄的关联:对分层监测策略的影响。
JAMA Oncol. 2017 Dec 1;3(12):1702-1706. doi: 10.1001/jamaoncol.2017.0619.
4
Universal screening for Lynch syndrome in endometrial cancers: frequency of germline mutations and identification of patients with Lynch-like syndrome.林奇综合征在子宫内膜癌中的普遍筛查:种系突变的频率及林奇样综合征患者的鉴定。
Hum Pathol. 2017 Dec;70:121-128. doi: 10.1016/j.humpath.2017.10.022. Epub 2017 Oct 28.
5
Frequent PIK3CA Mutations in Colorectal and Endometrial Tumors With 2 or More Somatic Mutations in Mismatch Repair Genes.错配修复基因存在2个或更多体细胞突变的结直肠癌和子宫内膜肿瘤中频繁出现的PIK3CA突变
Gastroenterology. 2016 Sep;151(3):440-447.e1. doi: 10.1053/j.gastro.2016.06.004. Epub 2016 Jun 11.
6
Associations of Pathogenic Variants in MLH1, MSH2, and MSH6 With Risk of Colorectal Adenomas and Tumors and With Somatic Mutations in Patients With Lynch Syndrome.MLH1、MSH2 和 MSH6 中的致病性变异与林奇综合征患者结直肠腺瘤和肿瘤的风险及体细胞突变的相关性。
Gastroenterology. 2020 Apr;158(5):1326-1333. doi: 10.1053/j.gastro.2019.12.032. Epub 2020 Jan 8.
7
Lynch Syndrome in Thai Endometrial Cancer Patients.林奇综合征与泰国子宫内膜癌患者。
Asian Pac J Cancer Prev. 2021 May 1;22(5):1477-1483. doi: 10.31557/APJCP.2021.22.5.1477.
8
Double somatic mismatch repair gene pathogenic variants as common as Lynch syndrome among endometrial cancer patients.子宫内膜癌患者中双体种系错配修复基因突变与林奇综合征一样常见。
Gynecol Oncol. 2021 Jan;160(1):161-168. doi: 10.1016/j.ygyno.2020.10.012. Epub 2020 Oct 21.
9
Rare germline mutation and MSH2-&MSH6 + expression in a double primary carcinoma of colorectal carcinoma and endometrial carcinoma: a case report.罕见的种系突变和 MSH2-MSH6 表达在结直肠癌和子宫内膜癌的双原发癌中:一例报告。
Diagn Pathol. 2024 Jan 31;19(1):25. doi: 10.1186/s13000-024-01447-8.
10
[Genetic analysis of 45 patients with suspected Lynch syndrome using next-generation sequencing].[利用二代测序技术对45例疑似林奇综合征患者进行基因分析]
Zhonghua Zhong Liu Za Zhi. 2021 Aug 23;43(8):843-849. doi: 10.3760/cma.j.cn112152-20190717-00441.

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