• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

H3.3K122A在小鼠胚胎干细胞中导致一种新形态表型。

H3.3K122A results in a neomorphic phenotype in mouse embryonic stem cells.

作者信息

Patty Benjamin, Jordan Cailin, Lardo Santana, Troy Kris, Hainer Sarah

机构信息

University of Pittsburgh.

出版信息

Res Sq. 2024 Aug 27:rs.3.rs-4824795. doi: 10.21203/rs.3.rs-4824795/v1.

DOI:10.21203/rs.3.rs-4824795/v1
PMID:39257982
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11384023/
Abstract

The histone variant H3.3 acts in coordination with histone posttranslational modifications and other chromatin features to facilitate appropriate transcription. Canonical histone H3 and histone variant H3.3 are post-translationally modified with the genomic distribution of these marks denoting different features and with more recent evidence suggesting that these modifications may influence transcription. While the majority of posttranslational modifications occur on histone tails, there are defined modifications within the globular domain, such as acetylation of H3K122/H3.3K122. To understand the function of the residue H3.3K122 in transcriptional regulation, we attempted to generate H3.3K122A mouse embryonic stem (mES) cells but were unsuccessful. Through multi-omic profiling of mutant cell lines harboring two or three of four H3.3 targeted alleles, we have uncovered that H3.3K122A is neomorphic and results in lethality. This is surprising as prior studies demonstrate H3.3-null mES cells are viable and pluripotent, albeit with reduced differentiation capacity. Together, these studies have uncovered a novel dependence of a globular domain residue of H3.3 for viability and broadened our understanding of how histone variants contribute to transcription regulation and pluripotency in mES cells.

摘要

组蛋白变体H3.3与组蛋白翻译后修饰及其他染色质特征协同作用,以促进适当的转录。经典组蛋白H3和组蛋白变体H3.3会发生翻译后修饰,这些修饰的基因组分布表示不同的特征,并且最近有证据表明这些修饰可能影响转录。虽然大多数翻译后修饰发生在组蛋白尾部,但在球状结构域内也存在特定的修饰,例如H3K122/H3.3K122的乙酰化。为了了解H3.3K122残基在转录调控中的功能,我们试图生成H3.3K122A小鼠胚胎干细胞(mES),但未成功。通过对携带四个H3.3靶向等位基因中的两个或三个的突变细胞系进行多组学分析,我们发现H3.3K122A具有新的表型并导致致死性。这令人惊讶,因为先前的研究表明H3.3基因敲除的mES细胞是有活力的且具有多能性,尽管其分化能力有所降低。总之,这些研究揭示了H3.3球状结构域残基对细胞活力的新依赖性,并拓宽了我们对组蛋白变体如何促进mES细胞转录调控和多能性的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/9595b86639da/nihpp-rs4824795v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/040d8b0fb227/nihpp-rs4824795v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/aa3139b0c941/nihpp-rs4824795v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/8a805bd5ef73/nihpp-rs4824795v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/718e2e4fb9c6/nihpp-rs4824795v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/9595b86639da/nihpp-rs4824795v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/040d8b0fb227/nihpp-rs4824795v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/aa3139b0c941/nihpp-rs4824795v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/8a805bd5ef73/nihpp-rs4824795v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/718e2e4fb9c6/nihpp-rs4824795v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc3/11384023/9595b86639da/nihpp-rs4824795v1-f0005.jpg

相似文献

1
H3.3K122A results in a neomorphic phenotype in mouse embryonic stem cells.H3.3K122A在小鼠胚胎干细胞中导致一种新形态表型。
Res Sq. 2024 Aug 27:rs.3.rs-4824795. doi: 10.21203/rs.3.rs-4824795/v1.
2
H3.3K122A results in a neomorphic phenotype in mouse embryonic stem cells.H3.3K122A 导致小鼠胚胎干细胞出现新表型。
Epigenetics Chromatin. 2024 Nov 1;17(1):32. doi: 10.1186/s13072-024-00557-3.
3
Multi-omic profiling of histone variant H3.3 lysine 27 methylation reveals a distinct role from canonical H3 in stem cell differentiation.组蛋白变体 H3.3 赖氨酸 27 位甲基化的多组学分析揭示了其在干细胞分化中与经典 H3 不同的作用。
Mol Omics. 2022 May 11;18(4):296-314. doi: 10.1039/d1mo00352f.
4
Mutations that prevent or mimic persistent post-translational modifications of the histone H3 globular domain cause lethality and growth defects in Drosophila.阻止或模拟组蛋白H3球状结构域持续翻译后修饰的突变会导致果蝇致死和生长缺陷。
Epigenetics Chromatin. 2016 Feb 29;9:9. doi: 10.1186/s13072-016-0059-3. eCollection 2016.
5
H3.3 contributes to chromatin accessibility and transcription factor binding at promoter-proximal regulatory elements in embryonic stem cells.H3.3 有助于胚胎干细胞中启动子近端调控元件的染色质可及性和转录因子结合。
Genome Biol. 2023 Feb 13;24(1):25. doi: 10.1186/s13059-023-02867-3.
6
Pluripotency factors and Polycomb Group proteins repress aryl hydrocarbon receptor expression in murine embryonic stem cells.多能性因子和多梳蛋白家族蛋白抑制小鼠胚胎干细胞中芳烃受体的表达。
Stem Cell Res. 2014 Jan;12(1):296-308. doi: 10.1016/j.scr.2013.11.007. Epub 2013 Nov 16.
7
Histone H3 globular domain acetylation identifies a new class of enhancers.组蛋白H3球状结构域乙酰化鉴定出一类新的增强子。
Nat Genet. 2016 Jun;48(6):681-6. doi: 10.1038/ng.3550. Epub 2016 Apr 18.
8
Dual roles of histone H3 lysine 9 acetylation in human embryonic stem cell pluripotency and neural differentiation.组蛋白H3赖氨酸9乙酰化在人类胚胎干细胞多能性和神经分化中的双重作用
J Biol Chem. 2015 Jan 23;290(4):2508-20. doi: 10.1074/jbc.M114.603761. Epub 2014 Dec 17.
9
Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in .变体和经典组蛋白 H3 赖氨酸 9 修饰在. 中的功能冗余
Genetics. 2018 Jan;208(1):229-244. doi: 10.1534/genetics.117.300480. Epub 2017 Nov 13.
10
Histone variants as emerging regulators of embryonic stem cell identity.组蛋白变体作为胚胎干细胞特性的新兴调控因子。
Epigenetics. 2015;10(7):563-73. doi: 10.1080/15592294.2015.1053682.

本文引用的文献

1
Knockout tales: the versatile roles of histone H3.3 in development and disease.敲除故事:组蛋白 H3.3 在发育和疾病中的多功能作用。
Epigenetics Chromatin. 2023 Oct 10;16(1):38. doi: 10.1186/s13072-023-00512-8.
2
FACT regulates pluripotency through proximal and distal regulation of gene expression in murine embryonic stem cells.事实表明,FACT 通过对鼠胚胎干细胞中基因表达的近端和远端调控来调节多能性。
BMC Biol. 2023 Aug 4;21(1):167. doi: 10.1186/s12915-023-01669-0.
3
The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells.
esBAF 和 ISWI 核小体重塑复合物影响重叠核小体和脆弱核小体在小鼠胚胎干细胞中的占有率。
BMC Genomics. 2023 Apr 13;24(1):201. doi: 10.1186/s12864-023-09287-4.
4
DAXX adds a de novo H3.3K9me3 deposition pathway to the histone chaperone network.DAXX 添加了一个从头开始的 H3.3K9me3 沉积途径到组蛋白伴侣网络。
Mol Cell. 2023 Apr 6;83(7):1075-1092.e9. doi: 10.1016/j.molcel.2023.02.009. Epub 2023 Mar 2.
5
H3.3 contributes to chromatin accessibility and transcription factor binding at promoter-proximal regulatory elements in embryonic stem cells.H3.3 有助于胚胎干细胞中启动子近端调控元件的染色质可及性和转录因子结合。
Genome Biol. 2023 Feb 13;24(1):25. doi: 10.1186/s13059-023-02867-3.
6
Enhancer RNA (eRNA) in Human Diseases.人类疾病中的增强子 RNA(eRNA)。
Int J Mol Sci. 2022 Sep 30;23(19):11582. doi: 10.3390/ijms231911582.
7
Multi-omic profiling of histone variant H3.3 lysine 27 methylation reveals a distinct role from canonical H3 in stem cell differentiation.组蛋白变体 H3.3 赖氨酸 27 位甲基化的多组学分析揭示了其在干细胞分化中与经典 H3 不同的作用。
Mol Omics. 2022 May 11;18(4):296-314. doi: 10.1039/d1mo00352f.
8
HIRA complex presets transcriptional potential through coordinating depositions of the histone variants H3.3 and H2A.Z on the poised genes in mESCs.HIRA 复合物通过协调组蛋白变体 H3.3 和 H2A.Z 在 mESCs 中的停泊基因上的沉积,预先设定转录潜能。
Nucleic Acids Res. 2022 Jan 11;50(1):191-206. doi: 10.1093/nar/gkab1221.
9
Alpha-arrestins Aly1/Art6 and Aly2/Art3 regulate trafficking of the glycerophosphoinositol transporter Git1 and impact phospholipid homeostasis.α-arrestins Aly1/Art6 和 Aly2/Art3 调节甘油磷酸肌醇转运蛋白 Git1 的转运,影响磷脂稳态。
Biol Cell. 2022 Jan;114(1):3-31. doi: 10.1111/boc.202100007. Epub 2021 Oct 8.
10
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.clusterProfiler 4.0:用于解释组学数据的通用富集工具。
Innovation (Camb). 2021 Jul 1;2(3):100141. doi: 10.1016/j.xinn.2021.100141. eCollection 2021 Aug 28.