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一种用于纤毛相关基因及其体内资源的优先级工具,为纤毛病研究开辟了新途径。

A prioritization tool for cilia-associated genes and their in vivo resources unveils new avenues for ciliopathy research.

机构信息

Department of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322, USA.

出版信息

Dis Model Mech. 2024 Oct 1;17(10). doi: 10.1242/dmm.052000. Epub 2024 Oct 14.

Abstract

Defects in ciliary signaling or mutations in proteins that localize to primary cilia lead to a class of human diseases known as ciliopathies. Approximately 10% of mammalian genes encode cilia-associated proteins, and a major gap in the cilia research field is knowing which genes to prioritize to study and finding the in vivo vertebrate mutant alleles and reagents available for their study. Here, we present a unified resource listing the cilia-associated human genes cross referenced to available mouse and zebrafish mutant alleles, and their associated phenotypes, as well as expression data in the kidney and functional data for vertebrate Hedgehog signaling. This resource empowers researchers to easily sort and filter genes based on their own expertise and priorities, cross reference with newly generated -omics datasets, and quickly find in vivo resources and phenotypes associated with a gene of interest.

摘要

纤毛信号通路缺陷或定位于初级纤毛的蛋白突变会导致一类被称为纤毛病的人类疾病。大约 10%的哺乳动物基因编码纤毛相关蛋白,而纤毛研究领域的一个主要空白是知道要优先研究哪些基因,并找到可用于研究的体内脊椎动物突变等位基因和试剂。在这里,我们提供了一个统一的资源,列出了与可用的小鼠和斑马鱼突变等位基因交叉引用的纤毛相关的人类基因,并列出了它们的相关表型,以及肾脏中的表达数据和脊椎动物 Hedgehog 信号传导的功能数据。这个资源使研究人员能够根据自己的专业知识和优先事项轻松地对基因进行排序和筛选,与新生成的组学数据集进行交叉引用,并快速找到与感兴趣基因相关的体内资源和表型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/018e/11512102/8ac38d016506/dmm-17-052000-g1.jpg

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