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利用拉曼光谱和机器学习识别乳腺癌。

Employing Raman Spectroscopy and Machine Learning for the Identification of Breast Cancer.

作者信息

Zhang Ya, Li Zheng, Li Zhongqiang, Wang Huaizhi, Regmi Dinkar, Zhang Jian, Feng Jiming, Yao Shaomian, Xu Jian

机构信息

Division of Electrical and Computer Engineering, College of Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA.

Division of Computer Science & Engineering, College of Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA.

出版信息

Biol Proced Online. 2024 Sep 12;26(1):28. doi: 10.1186/s12575-024-00255-0.

DOI:10.1186/s12575-024-00255-0
PMID:39266953
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11396685/
Abstract

BACKGROUND

Breast cancer poses a significant health risk to women worldwide, with approximately 30% being diagnosed annually in the United States. The identification of cancerous mammary tissues from non-cancerous ones during surgery is crucial for the complete removal of tumors.

RESULTS

Our study innovatively utilized machine learning techniques (Random Forest (RF), Support Vector Machine (SVM), and Convolutional Neural Network (CNN)) alongside Raman spectroscopy to streamline and hasten the differentiation of normal and late-stage cancerous mammary tissues in mice. The classification accuracy rates achieved by these models were 94.47% for RF, 96.76% for SVM, and 97.58% for CNN, respectively. To our best knowledge, this study was the first effort in comparing the effectiveness of these three machine-learning techniques in classifying breast cancer tissues based on their Raman spectra. Moreover, we innovatively identified specific spectral peaks that contribute to the molecular characteristics of the murine cancerous and non-cancerous tissues.

CONCLUSIONS

Consequently, our integrated approach of machine learning and Raman spectroscopy presents a non-invasive, swift diagnostic tool for breast cancer, offering promising applications in intraoperative settings.

摘要

背景

乳腺癌对全球女性的健康构成重大风险,在美国,每年约有30%的女性被诊断出患有乳腺癌。手术过程中区分癌性乳腺组织和非癌性乳腺组织对于肿瘤的彻底切除至关重要。

结果

我们的研究创新性地将机器学习技术(随机森林(RF)、支持向量机(SVM)和卷积神经网络(CNN))与拉曼光谱相结合,以简化和加速小鼠正常和晚期癌性乳腺组织的区分。这些模型的分类准确率分别为:随机森林94.47%、支持向量机96.76%、卷积神经网络97.58%。据我们所知,本研究是首次比较这三种机器学习技术基于拉曼光谱对乳腺癌组织进行分类的有效性。此外,我们创新性地识别出了有助于小鼠癌性和非癌性组织分子特征的特定光谱峰。

结论

因此,我们的机器学习与拉曼光谱相结合的方法为乳腺癌提供了一种非侵入性、快速的诊断工具,在术中应用方面具有广阔前景。

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本文引用的文献

1
Raman spectroscopy and machine learning unveil biomolecular alterations in invasive breast cancer.拉曼光谱和机器学习揭示浸润性乳腺癌中的生物分子改变。
J Biomed Opt. 2023 Mar;28(3):036009. doi: 10.1117/1.JBO.28.3.036009. Epub 2023 Mar 30.
2
Raman spectroscopy and convolutional neural networks for monitoring biochemical radiation response in breast tumour xenografts.拉曼光谱和卷积神经网络监测乳腺癌异种移植的生化辐射反应。
Sci Rep. 2023 Jan 27;13(1):1530. doi: 10.1038/s41598-023-28479-2.
3
Polarized Micro-Raman Spectroscopy and 2D Convolutional Neural Network Applied to Structural Analysis and Discrimination of Breast Cancer.
偏振微拉曼光谱和二维卷积神经网络在乳腺癌结构分析和鉴别中的应用。
Biosensors (Basel). 2022 Dec 30;13(1):65. doi: 10.3390/bios13010065.
4
Cancer statistics, 2023.癌症统计数据,2023 年。
CA Cancer J Clin. 2023 Jan;73(1):17-48. doi: 10.3322/caac.21763.
5
Machine-learning-assisted spontaneous Raman spectroscopy classification and feature extraction for the diagnosis of human laryngeal cancer.基于机器学习的自发 Raman 光谱分类和特征提取在人喉癌诊断中的应用。
Comput Biol Med. 2022 Jul;146:105617. doi: 10.1016/j.compbiomed.2022.105617. Epub 2022 May 18.
6
Raman spectroscopy: current applications in breast cancer diagnosis, challenges and future prospects.拉曼光谱:在乳腺癌诊断中的当前应用、挑战及未来前景
Br J Cancer. 2022 May;126(8):1125-1139. doi: 10.1038/s41416-021-01659-5. Epub 2021 Dec 10.
7
Detection of pancreatic cancer by indocyanine green-assisted fluorescence imaging in the first and second near-infrared windows.通过吲哚菁绿辅助荧光成像在第一和第二近红外窗口检测胰腺癌。
Cancer Commun (Lond). 2021 Dec;41(12):1431-1434. doi: 10.1002/cac2.12236. Epub 2021 Nov 17.
8
Detection of pancreatic cancer by convolutional-neural-network-assisted spontaneous Raman spectroscopy with critical feature visualization.卷积神经网络辅助自发拉曼光谱法通过关键特征可视化检测胰腺癌。
Neural Netw. 2021 Dec;144:455-464. doi: 10.1016/j.neunet.2021.09.006. Epub 2021 Sep 16.
9
Raman spectroscopy and machine learning for the classification of breast cancers.拉曼光谱和机器学习在乳腺癌分类中的应用。
Spectrochim Acta A Mol Biomol Spectrosc. 2022 Jan 5;264:120300. doi: 10.1016/j.saa.2021.120300. Epub 2021 Aug 21.
10
Classifying breast cancer tissue by Raman spectroscopy with one-dimensional convolutional neural network.使用一维卷积神经网络通过拉曼光谱对乳腺癌组织进行分类。
Spectrochim Acta A Mol Biomol Spectrosc. 2021 Jul 15;256:119732. doi: 10.1016/j.saa.2021.119732. Epub 2021 Mar 22.