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迈向基于 DNA 的生物过程记录。

Toward DNA-Based Recording of Biological Processes.

机构信息

Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.

Graduate School of Engineering Biology, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.

出版信息

Int J Mol Sci. 2024 Aug 26;25(17):9233. doi: 10.3390/ijms25179233.

Abstract

Exploiting the inherent compatibility of DNA-based data storage with living cells, various cellular recording approaches have been developed for recording and retrieving biologically relevant signals in otherwise inaccessible locations, such as inside the body. This review provides an overview of the current state of engineered cellular memory systems, highlighting their design principles, advantages, and limitations. We examine various technologies, including CRISPR-Cas systems, recombinases, retrons, and DNA methylation, that enable these recording systems. Additionally, we discuss potential strategies for improving recording accuracy, scalability, and durability to address current limitations in the field. This emerging modality of biological measurement will be key to gaining novel insights into diverse biological processes and fostering the development of various biotechnological applications, from environmental sensing to disease monitoring and beyond.

摘要

利用基于 DNA 的数据存储与活细胞固有的兼容性,已经开发出各种细胞记录方法,用于记录和检索在其他无法进入的位置(如体内)的生物相关信号。本综述概述了工程化细胞记忆系统的现状,强调了它们的设计原则、优点和局限性。我们研究了各种技术,包括 CRISPR-Cas 系统、重组酶、反转录酶和 DNA 甲基化,这些技术使这些记录系统成为可能。此外,我们还讨论了提高记录准确性、可扩展性和耐久性的潜在策略,以解决该领域目前的局限性。这种新兴的生物测量模式将是深入了解各种生物过程并促进从环境感应到疾病监测等各种生物技术应用发展的关键。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2a5/11394691/d818aab70c1e/ijms-25-09233-g001.jpg

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