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探索放射性碘标记阿那曲唑和表柔比星作为乳腺癌 AKT1 靶向放射性药物:计算机模拟分析和具有功能核成像意义的潜在治疗效果。

Exploring Radioiodinated Anastrozole and Epirubicin as AKT1-Targeted Radiopharmaceuticals in Breast Cancer: In Silico Analysis and Potential Therapeutic Effect with Functional Nuclear Imagining Implications.

机构信息

Department of Internal Medicine, College of Medicine, Imam Mohammad Ibn Saud Islamic University (IMSIU), P.O. Box 90950, Riyadh 11623, Saudi Arabia.

出版信息

Molecules. 2024 Sep 4;29(17):4203. doi: 10.3390/molecules29174203.

Abstract

This study evaluates radio-iodinated anastrozole ([I]anastrozole) and epirubicin ([I]epirubicin) for AKT1-targeted breast cancer therapy, utilizing radiopharmaceutical therapy (RPT) for personalized treatment. Through molecular docking and dynamics simulations (200 ns), it investigates these compounds' binding affinities and mechanisms to the AKT1 enzyme, compared to the co-crystallized ligand, a known AKT1 inhibitor. Molecular docking results show that [I]epirubicin has the highest Δ (-11.84 kcal/mol), indicating a superior binding affinity compared to [I] anastrozole (-10.68 kcal/mol) and the co-crystallized ligand (-9.53 kcal/mol). Molecular dynamics (MD) simulations confirmed a stable interaction with the AKT1 enzyme, with [I]anastrozole and [I]epirubicin reaching stability after approximately 68 ns with an average RMSD of around 2.2 Å, while the co-crystallized ligand stabilized at approximately 2.69 Å after 87 ns. RMSF analysis showed no significant shifts in residues or segments, with consistent patterns and differences of less than 2 Å, maintaining enzyme stability. The [I]epirubicin complex maintained an average of four H-bonds, indicating strong and stable interactions, while [I]anastrozole consistently formed three H-bonds. The average Rg values for both complexes were ~16.8 ± 0.1 Å, indicating no significant changes in the enzyme's compactness, thus preserving structural integrity. These analyses reveal stable binding and minimal structural perturbations, suggesting the high potential for AKT1 inhibition. MM-PBSA calculations confirm the potential of these radio-iodinated compounds as AKT1 inhibitors, with [I]epirubicin exhibiting the most favorable binding energy (-23.57 ± 0.14 kcal/mol) compared to [I]anastrozole (-20.03 ± 0.15 kcal/mol) and the co-crystallized ligand (-16.38 ± 0.14 kcal/mol), highlighting the significant role of electrostatic interactions in stabilizing the complex. The computational analysis shows [I]anastrozole and [I]epirubicin may play promising roles as AKT1 inhibitors, especially [I]epirubicin for its high binding affinity and dynamic receptor interactions. These findings, supported by molecular docking scores and MM-PBSA binding energies, advocate for their potential superior inhibitory capability against the AKT1 enzyme. Nevertheless, it is crucial to validate these computational predictions through in vitro and in vivo studies to thoroughly evaluate the therapeutic potential and viability of these compounds for AKT1-targeted breast cancer treatment.

摘要

本研究评估了放射性碘标记的阿那曲唑 ([I]阿那曲唑) 和表柔比星 ([I]表柔比星) 用于 AKT1 靶向乳腺癌治疗的效果,利用放射性药物治疗 (RPT) 进行个体化治疗。通过分子对接和动力学模拟 (200ns),研究了这些化合物与 AKT1 酶的结合亲和力和机制,与共晶配体(一种已知的 AKT1 抑制剂)进行了比较。分子对接结果表明,[I]表柔比星的 Δ(-11.84kcal/mol) 值最高,表明与 [I]阿那曲唑 (-10.68kcal/mol) 和共晶配体 (-9.53kcal/mol) 相比,具有更高的结合亲和力。分子动力学 (MD) 模拟证实了与 AKT1 酶的稳定相互作用,[I]阿那曲唑和 [I]表柔比星在大约 68ns 后达到稳定,平均 RMSD 约为 2.2Å,而共晶配体在 87ns 后稳定在约 2.69Å。RMSF 分析显示残基或片段没有明显的移动,模式一致,差异小于 2Å,保持酶的稳定性。[I]表柔比星复合物保持平均 4 个氢键,表明具有强而稳定的相互作用,而 [I]阿那曲唑始终形成 3 个氢键。两个复合物的平均 Rg 值均约为 16.8±0.1Å,表明酶的紧凑性没有明显变化,从而保持了结构的完整性。这些分析表明稳定的结合和最小的结构干扰,表明对 AKT1 抑制具有很高的潜力。MM-PBSA 计算证实了这些放射性碘标记化合物作为 AKT1 抑制剂的潜力,[I]表柔比星 (-23.57±0.14kcal/mol) 的结合能比 [I]阿那曲唑 (-20.03±0.15kcal/mol) 和共晶配体 (-16.38±0.14kcal/mol) 更有利,突出了静电相互作用在稳定复合物方面的重要作用。计算分析表明 [I]阿那曲唑和 [I]表柔比星可能作为 AKT1 抑制剂发挥有前途的作用,特别是 [I]表柔比星,因为它具有较高的结合亲和力和动态受体相互作用。这些发现得到了分子对接评分和 MM-PBSA 结合能的支持,表明它们对 AKT1 酶具有潜在的优越抑制能力。然而,通过体外和体内研究验证这些计算预测至关重要,以全面评估这些化合物在 AKT1 靶向乳腺癌治疗中的治疗潜力和可行性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c63/11397058/7d7725155637/molecules-29-04203-g001.jpg

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