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针对 17β-羟类固醇脱氢酶 1(17β-HSD1)催化作用的乳腺癌靶向治疗的潜在抑制剂的计算机分析。

In silico analysis of potential inhibitors for breast cancer targeting 17beta-hydroxysteroid dehydrogenase type 1 (17beta-HSD1) catalyses.

机构信息

Department of Pharmacy, Faculty of Allied Health Sciences, Daffodil International University, Dhaka, Bangladesh.

Department of Clinical Biochemistry, College of Medicine, University of Jeddah, Jeddah, Saudi Arabia.

出版信息

J Cell Mol Med. 2024 Aug;28(15):e18584. doi: 10.1111/jcmm.18584.

DOI:10.1111/jcmm.18584
PMID:39135338
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11319393/
Abstract

Breast cancer (BC) is still one of the major issues in world health, especially for women, which necessitates innovative therapeutic strategies. In this study, we investigated the efficacy of retinoic acid derivatives as inhibitors of 17beta-hydroxysteroid dehydrogenase type 1 (17beta-HSD1), which plays a crucial role in the biosynthesis and metabolism of oestrogen and thereby influences the progression of BC and, the main objective of this investigation is to identify the possible drug candidate against BC through computational drug design approach including PASS prediction, molecular docking, ADMET profiling, molecular dynamics simulations (MD) and density functional theory (DFT) calculations. The result has reported that total eight derivatives with high binding affinity and promising pharmacokinetic properties among 115 derivatives. In particular, ligands 04 and 07 exhibited a higher binding affinity with values of -9.9 kcal/mol and -9.1 kcal/mol, respectively, than the standard drug epirubicin hydrochloride, which had a binding affinity of -8.2 kcal/mol. The stability of the ligand-protein complexes was further confirmed by MD simulations over a 100-ns trajectory, which included assessments of hydrogen bonds, root mean square deviation (RMSD), root mean square Fluctuation (RMSF), dynamic cross-correlation matric (DCCM) and principal component analysis. The study emphasizes the need for experimental validation to confirm the therapeutic utility of these compounds. This study enhances the computational search for new BC drugs and establishes a solid foundation for subsequent experimental and clinical research.

摘要

乳腺癌(BC)仍然是世界健康的主要问题之一,尤其是对女性而言,这需要创新的治疗策略。在这项研究中,我们研究了视黄酸衍生物作为 17β-羟甾类脱氢酶 1 型(17β-HSD1)抑制剂的疗效,17β-HSD1 在雌激素的生物合成和代谢中起着至关重要的作用,从而影响 BC 的进展,本研究的主要目的是通过计算药物设计方法(包括 PASS 预测、分子对接、ADMET 分析、分子动力学模拟(MD)和密度泛函理论(DFT)计算)来确定针对 BC 的可能药物候选物。结果报告了在 115 种衍生物中,有 8 种衍生物具有高结合亲和力和有前途的药代动力学特性。特别是配体 04 和 07 与标准药物盐酸表柔比星的结合亲和力分别为-9.9 kcal/mol 和-9.1 kcal/mol,高于后者的-8.2 kcal/mol。通过 100-ns 轨迹的 MD 模拟进一步证实了配体-蛋白复合物的稳定性,其中包括氢键、均方根偏差(RMSD)、均方根波动(RMSF)、动态互相关矩阵(DCCM)和主成分分析的评估。该研究强调了需要进行实验验证以确认这些化合物的治疗效用。这项研究增强了针对新的 BC 药物的计算搜索,并为随后的实验和临床研究奠定了坚实的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/f468bc219823/JCMM-28-e18584-g007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/a246e94f97e6/JCMM-28-e18584-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/f468bc219823/JCMM-28-e18584-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/71903962f0aa/JCMM-28-e18584-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/40808a95419a/JCMM-28-e18584-g003.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/f0a6f0effcbb/JCMM-28-e18584-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/5d45b9454aad/JCMM-28-e18584-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/a93281707f3a/JCMM-28-e18584-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/a246e94f97e6/JCMM-28-e18584-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f251/11319393/f468bc219823/JCMM-28-e18584-g007.jpg

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