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2,2,2-三氟乙醇中的氢键。

Hydrogen bonding in 2,2,2-trifluoroethanol.

作者信息

Ng Soon, Xie Yaoming, Schaefer Henry F

机构信息

Department of Chemistry, University of Malaya, 50603, Kuala Lumpur, Malaysia.

Center for Computational Quantum Chemistry, University of Georgia, Athens, GA, 30602, USA.

出版信息

J Mol Model. 2024 Sep 14;30(10):333. doi: 10.1007/s00894-024-06135-4.

Abstract

CONTEXT

2,2,2-Trifluoroethanol (TFE) is known as a membrane mimetic solvent. The IR spectrum, H NMR spectrum, C NMR spin‒lattice relaxation times (T), and nuclear Overhauser effect (NOE) data are consistent with extensive hydrogen bonding in TFE, but do not lead to structural features of the hydrogen bonding. Hence, DFT computations were carried out. The results predict the existence of a set of H-bonded dimers and trimers. The bond lengths and dihedral angles in these complexes are obtained, together with their dissociation energies. Computations were also performed for the geometry of the two conformers of the isolated monomer. The structure of one of the dimers consists of a 7-member cyclic fragment with a free CFCH side chain. One set of the trimer structures involves the OH of a third monomer H-bonding to one of the F atoms in the CF group of the side chain of this dimer, thereby creating three trimer isomers. A fourth trimer cluster is formed from three monomers in which three OH∙∙∙O bonds create a cyclic fragment with three CFCH side chains. The high dissociation energy (with respect to three monomers) indicates the high stability of the trimer complexes. The structural features of the trimer complexes resemble the structure of a conventional liquid crystal molecule and are postulated to resemble the latter in properties and function in solution, but at a much shorter timescale because of the noncovalent bonding. This hydrogen bonding phenomenon of TFE may be related to its function as a membrane memetic solvent.

METHODS

Initially, IR and NMR spectroscopic methods were used. Standard procedures were followed. For the computations, a hybrid DFT method with empirical dispersion, ωB97X-D, was used. The basis set, 6-311++G**, is of triple-ζ quality, in which polarization functions and diffuse functions were added for all atoms.

摘要

背景

2,2,2-三氟乙醇(TFE)是一种膜模拟溶剂。红外光谱、氢核磁共振谱、碳核磁共振自旋晶格弛豫时间(T)和核Overhauser效应(NOE)数据表明TFE中存在广泛的氢键,但并未揭示氢键的结构特征。因此,进行了密度泛函理论(DFT)计算。结果预测存在一组氢键连接的二聚体和三聚体。获得了这些配合物中的键长和二面角以及它们的解离能。还对孤立单体的两种构象的几何结构进行了计算。其中一种二聚体结构由一个带有游离CFCH侧链的七元环状片段组成。一组三聚体结构涉及第三个单体的OH与该二聚体侧链CF基团中的一个F原子形成氢键,从而产生三种三聚体异构体。第四个三聚体簇由三个单体形成,其中三个OH∙∙∙O键形成一个带有三个CFCH侧链的环状片段。高解离能(相对于三个单体)表明三聚体配合物具有高稳定性。三聚体配合物的结构特征类似于传统液晶分子的结构,据推测在溶液中的性质和功能与后者相似,但由于是非共价键合,时间尺度要短得多。TFE的这种氢键现象可能与其作为膜模拟溶剂的功能有关。

方法

最初使用了红外和核磁共振光谱方法。遵循标准程序。对于计算,使用了带有经验色散的杂化DFT方法ωB97X-D。基组6-311++G**具有三重ζ质量,其中为所有原子添加了极化函数和弥散函数。

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