Department of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Department of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
STAR Protoc. 2024 Sep 20;5(3):103305. doi: 10.1016/j.xpro.2024.103305. Epub 2024 Sep 12.
Calcium imaging has become a popular way to probe astrocyte activity, but few techniques holistically capture discrete calcium signals occurring across the astrocyte domain. Here, we introduce STARDUST, a pipeline for the spatio-temporal analysis of regional dynamics and unbiased sorting of transients from fluorescence recordings of astrocytes. We describe steps for installing software, detecting active pixel patches, obtaining region of activity (ROA) maps, and extracting time series from ROAs. We then detail procedures for extracting signal features using custom-made code.
钙成像技术已成为探测星形胶质细胞活动的一种常用方法,但很少有技术能够全面捕捉整个星形胶质细胞区域内离散的钙信号。在这里,我们引入了 STARDUST,这是一种用于分析区域性动力学和从星形胶质细胞荧光记录中对瞬态进行无偏分类的时空分析的管道。我们描述了安装软件、检测活动像素补丁、获取活动区域 (ROA) 地图以及从 ROA 中提取时间序列的步骤。然后,我们详细介绍了使用定制代码提取信号特征的过程。