• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用R包评估广义相加模型中预测变量的相对重要性。

Evaluating the relative importance of predictors in Generalized Additive Models using the R package.

作者信息

Lai Jiangshan, Tang Jing, Li Tingyuan, Zhang Aiying, Mao Lingfeng

机构信息

College of Ecology and Environment, Nanjing Forestry University, Nanjing, 210037, China.

Research Center of Quantitative Ecology, Nanjing Forestry University, Nanjing 210037, China.

出版信息

Plant Divers. 2024 Jun 14;46(4):542-546. doi: 10.1016/j.pld.2024.06.002. eCollection 2024 Jul.

DOI:10.1016/j.pld.2024.06.002
PMID:39280972
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11390626/
Abstract

Generalized Additive Models (GAMs) are widely employed in ecological research, serving as a powerful tool for ecologists to explore complex nonlinear relationships between a response variable and predictors. Nevertheless, evaluating the relative importance of predictors with concurvity (analogous to collinearity) on response variables in GAMs remains a challenge. To address this challenge, we developed an R package named . calculates individual values for predictors, based on the concept of 'average shared variance', a method previously introduced for multiple regression and canonical analyses. Through these individual s, which add up to the overall , researchers can evaluate the relative importance of each predictor within GAMs. We illustrate the utility of the package by evaluating the relative importance of emission sources and meteorological factors in explaining ozone concentration variability in air quality data from London, UK. We believe that the package will improve the interpretation of results obtained from GAMs.

摘要

广义相加模型(GAMs)在生态学研究中被广泛应用,是生态学家探索响应变量与预测变量之间复杂非线性关系的有力工具。然而,评估具有共曲线性(类似于共线性)的预测变量对GAMs中响应变量的相对重要性仍然是一项挑战。为应对这一挑战,我们开发了一个名为 的R包。该包基于“平均共享方差”的概念为预测变量计算个体 值,“平均共享方差”是先前为多元回归和典型分析引入的一种方法。通过这些相加得到总体 的个体 值,研究人员可以评估GAMs中每个预测变量的相对重要性。我们通过评估排放源和气象因素在解释英国伦敦空气质量数据中臭氧浓度变异性方面的相对重要性,来说明 包的实用性。我们相信 包将改善对从GAMs获得的结果的解释。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ec/11390626/d50bec899d19/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ec/11390626/3f5a161aafbc/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ec/11390626/d50bec899d19/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ec/11390626/3f5a161aafbc/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ec/11390626/d50bec899d19/gr2.jpg

相似文献

1
Evaluating the relative importance of predictors in Generalized Additive Models using the R package.使用R包评估广义相加模型中预测变量的相对重要性。
Plant Divers. 2024 Jun 14;46(4):542-546. doi: 10.1016/j.pld.2024.06.002. eCollection 2024 Jul.
2
Hierarchical generalized additive models in ecology: an introduction with mgcv.生态学中的分层广义相加模型:使用mgcv的介绍
PeerJ. 2019 May 27;7:e6876. doi: 10.7717/peerj.6876. eCollection 2019.
3
Statistical modelling of roadside and urban background ultrafine and accumulation mode particle number concentrations using generalized additive models.利用广义加性模型对路边和城市背景下超细颗粒和积聚模态颗粒数浓度进行统计建模。
Sci Total Environ. 2020 Feb 10;703:134570. doi: 10.1016/j.scitotenv.2019.134570. Epub 2019 Nov 3.
4
[Interactive Effects of the Influencing Factors on the Changes of O Concentrations Based on GAMs Model in Chengdu].[基于广义相加模型的成都市影响因素对O浓度变化的交互作用]
Huan Jing Ke Xue. 2021 Nov 8;42(11):5228-5238. doi: 10.13227/j.hjkx.202102056.
5
Exploring bias in a generalized additive model for spatial air pollution data.探索空间空气污染数据广义相加模型中的偏差。
Environ Health Perspect. 2003 Aug;111(10):1283-8. doi: 10.1289/ehp.6047.
6
A bootstrap method to avoid the effect of concurvity in generalised additive models in time series studies of air pollution.一种用于避免在空气污染时间序列研究的广义相加模型中协曲度影响的自助法。
J Epidemiol Community Health. 2005 Oct;59(10):881-4. doi: 10.1136/jech.2004.026740.
7
Development and validation of an interpretable neural network for prediction of postoperative in-hospital mortality.用于预测术后院内死亡率的可解释神经网络的开发与验证
NPJ Digit Med. 2021 Jan 8;4(1):8. doi: 10.1038/s41746-020-00377-1.
8
Multi-scale trend analysis of water quality using error propagation of generalized additive models.基于广义加性模型误差传播的水质多尺度趋势分析。
Sci Total Environ. 2022 Jan 1;802:149927. doi: 10.1016/j.scitotenv.2021.149927. Epub 2021 Aug 26.
9
Emissions and meteorological impacts on PM species concentrations in Southern California using generalized additive modeling.利用广义加性模型研究南加州大气颗粒物物种浓度的排放及气象影响。
Sci Total Environ. 2023 Sep 15;891:164464. doi: 10.1016/j.scitotenv.2023.164464. Epub 2023 May 27.
10
The use of generalised additive models (GAM) in dentistry.广义相加模型(GAM)在牙科领域的应用。
Community Dent Health. 1997 Dec;14(4):221-6.

引用本文的文献

1
Biological and Physical Environmental Drivers of Diet Variation in Northern Fur Seals.北海狗饮食变化的生物和物理环境驱动因素
Ecol Evol. 2025 Aug 18;15(8):e71998. doi: 10.1002/ece3.71998. eCollection 2025 Aug.
2
Variation in self-compatibility among genotypes and across ontogeny in a self-fertilizing vertebrate, .一种自体受精脊椎动物中不同基因型间以及个体发育过程中自交亲和性的变异
Proc Biol Sci. 2025 Aug;292(2052):20250919. doi: 10.1098/rspb.2025.0919. Epub 2025 Aug 13.
3
Chinese Pangolins in China Demonstrate Regional Differences in Burrow Habitat Selection.

本文引用的文献

1
A century of statistical Ecology.一个世纪的统计生态学。
Ecology. 2024 Jun;105(6):e4283. doi: 10.1002/ecy.4283. Epub 2024 May 13.
2
Driving Forces of Meteorology and Emission Changes on Surface Ozone in the Huaihe River Basin, China.中国淮河流域气象与排放变化对地表臭氧的驱动因素
Water Air Soil Pollut. 2023;234(6):355. doi: 10.1007/s11270-023-06345-1. Epub 2023 May 27.
3
Emissions and meteorological impacts on PM species concentrations in Southern California using generalized additive modeling.利用广义加性模型研究南加州大气颗粒物物种浓度的排放及气象影响。
中国穿山甲在中国的洞穴栖息地选择存在区域差异。
Animals (Basel). 2025 Jul 16;15(14):2093. doi: 10.3390/ani15142093.
4
Lagged precipitation effects on plant production across terrestrial biomes.滞后降水对陆地生物群落植物生产的影响。
Nat Ecol Evol. 2025 Jul 28. doi: 10.1038/s41559-025-02806-4.
5
Seasonal and intracanopy shifts in the fates of absorbed photons in central Amazonian forests: implications for leaf fluorescence and photosynthesis.亚马孙中部森林中吸收光子命运的季节性和冠层内变化:对叶片荧光和光合作用的影响
New Phytol. 2025 Oct;248(1):76-91. doi: 10.1111/nph.70183. Epub 2025 May 29.
6
Climate change impacts to foraging seascapes for a highly migratory top predator.气候变化对一种高度洄游的顶级捕食者的觅食海域产生影响。
Mov Ecol. 2025 May 9;13(1):33. doi: 10.1186/s40462-025-00558-1.
7
Natural and Human Disturbances Have Non-Linear Effects on Whole-Ecosystem Carbon Storage in an African Savanna.自然和人为干扰对非洲稀树草原的全生态系统碳储量具有非线性影响。
Glob Chang Biol. 2025 Apr;31(4):e70163. doi: 10.1111/gcb.70163.
8
Spatiotemporal Dynamics of Fish Density in a Deep-Water Reservoir: Hydroacoustic Assessment of Aggregation Patterns and Key Drivers.深水水库中鱼类密度的时空动态:聚集模式和关键驱动因素的水声评估
Animals (Basel). 2025 Apr 7;15(7):1068. doi: 10.3390/ani15071068.
9
Fish community composition in the tropical archipelago of São Tomé and Príncipe.圣多美和普林西比热带群岛的鱼类群落组成。
PLoS One. 2024 Nov 1;19(11):e0312849. doi: 10.1371/journal.pone.0312849. eCollection 2024.
Sci Total Environ. 2023 Sep 15;891:164464. doi: 10.1016/j.scitotenv.2023.164464. Epub 2023 May 27.
4
Variable selection and importance in presence of high collinearity: an application to the prediction of lean body mass from multi-frequency bioelectrical impedance.高共线性情况下的变量选择与重要性:多频生物电阻抗预测瘦体重的应用
J Appl Stat. 2020 May 13;48(9):1644-1658. doi: 10.1080/02664763.2020.1763930. eCollection 2021.
5
Generalized additive models: Building evidence of air pollution, climate change and human health.广义加性模型:构建空气污染、气候变化与人类健康关联的证据。
Environ Int. 2019 Nov;132:104987. doi: 10.1016/j.envint.2019.104987. Epub 2019 Aug 6.
6
Hierarchical generalized additive models in ecology: an introduction with mgcv.生态学中的分层广义相加模型:使用mgcv的介绍
PeerJ. 2019 May 27;7:e6876. doi: 10.7717/peerj.6876. eCollection 2019.
7
Chlorophyll a predictability and relative importance of factors governing lake phytoplankton at different timescales.叶绿素 a 对不同时间尺度湖泊浮游植物的可预测性及其控制因素的相对重要性。
Sci Total Environ. 2019 Jan 15;648:472-480. doi: 10.1016/j.scitotenv.2018.08.146. Epub 2018 Aug 11.
8
Forecast of severe fever with thrombocytopenia syndrome incidence with meteorological factors.预测伴有发热伴血小板减少综合征的严重发热发病率与气象因素的关系。
Sci Total Environ. 2018 Jun 1;626:1188-1192. doi: 10.1016/j.scitotenv.2018.01.196. Epub 2018 Feb 19.
9
Comment on "Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification".评论“白垩纪陆地革命和 K-Pg 灭绝对哺乳动物多样性的影响”。
Science. 2012 Jul 6;337(6090):34; author reply 34. doi: 10.1126/science.1220078.
10
Regression analysis of spatial data.空间数据的回归分析。
Ecol Lett. 2010 Feb;13(2):246-64. doi: 10.1111/j.1461-0248.2009.01422.x.