How well does the adaptive feature representation learning approach identify human mRNA N4-acetylcytidine sites?
作者信息
Kumar Rahul, Wang Yanfeng, Dhanda Sandeep Kumar
机构信息
Department of Biotechnology, Indian Institute of Technology, Hyderabad, India.
Beidahuang Industry Group General Hospital, Harbin 150001, China.
出版信息
Mol Ther Nucleic Acids. 2024 Aug 29;35(3):102300. doi: 10.1016/j.omtn.2024.102300. eCollection 2024 Sep 10.
Abstract
摘要
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本文引用的文献
1
ac4C-AFL: A high-precision identification of human mRNA N4-acetylcytidine sites based on adaptive feature representation learning.ac4C-AFL：基于自适应特征表示学习的人类mRNA N4-乙酰胞苷位点的高精度识别
Mol Ther Nucleic Acids. 2024 Apr 24;35(2):102192. doi: 10.1016/j.omtn.2024.102192. eCollection 2024 Jun 11.
2
iRNA-ac4C: A novel computational method for effectively detecting N4-acetylcytidine sites in human mRNA.iRNA-ac4C：一种有效检测人 mRNA 中 N4-乙酰胞嘧啶位点的新型计算方法。
Int J Biol Macromol. 2023 Feb 1;227:1174-1181. doi: 10.1016/j.ijbiomac.2022.11.299. Epub 2022 Dec 5.
3
Detection technologies for RNA modifications.RNA 修饰的检测技术。
Exp Mol Med. 2022 Oct;54(10):1601-1616. doi: 10.1038/s12276-022-00821-0. Epub 2022 Oct 21.
4
Acetylation of Cytidine in mRNA Promotes Translation Efficiency.mRNA 中的胞嘧啶乙酰化促进翻译效率。
Cell. 2018 Dec 13;175(7):1872-1886.e24. doi: 10.1016/j.cell.2018.10.030. Epub 2018 Nov 15.
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