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结构生物学如何改变我们对二十面体病毒的认识。

How structural biology has changed our understanding of icosahedral viruses.

机构信息

Science Department, Autonomous University of San Luis Potosi, San Luis Potosí, Mexico.

High-Resolution Microscopy Section, Research Center for Health Sciences and Biomedicine, Autonomous University of San Luis Potosi, San Luis Potosi, Mexico.

出版信息

J Virol. 2024 Oct 22;98(10):e0111123. doi: 10.1128/jvi.01111-23. Epub 2024 Sep 18.

Abstract

Cryo-electron microscopy and tomography have allowed us to unveil the remarkable structure of icosahedral viruses. However, in the past few years, the idea that these viruses must have perfectly symmetric virions, but in some cases, it might not be true. This has opened the door to challenging paradigms in structural virology and raised new questions about the biological implications of "unusual" or "defective" symmetries and structures. Also, the continual improvement of these technologies, coupled with more rigorous sample purification protocols, improvements in data processing, and the use of artificial intelligence, has allowed solving the structure of sub-viral particles in highly heterogeneous samples and finding novel symmetries or structural defects. In this review, I initially analyzed the case of the symmetry and composition of hepatitis B virus-produced spherical sub-viral particles. Then, I focused on Alphaviruses as an example of "imperfect" icosahedrons and analyzed how structural biology has changed our understanding of the Alphavirus assembly and some biological implications arising from these discoveries.

摘要

冷冻电子显微镜和断层扫描技术使我们能够揭示二十面体病毒的惊人结构。然而,在过去的几年中,人们认为这些病毒的病毒粒子必须具有完美的对称结构,但在某些情况下,事实可能并非如此。这为结构病毒学中的挑战性范式打开了大门,并提出了关于“异常”或“有缺陷”的对称性和结构的生物学意义的新问题。此外,这些技术的不断改进,加上更严格的样品纯化方案、数据处理的改进以及人工智能的使用,使得解决高度异质样品中的亚病毒粒子的结构和发现新的对称性或结构缺陷成为可能。在这篇综述中,我最初分析了乙型肝炎病毒产生的球形亚病毒粒子的对称性和组成的案例。然后,我以甲病毒为例,分析了“不完美”的二十面体,以及结构生物学如何改变我们对甲病毒组装的理解,以及这些发现所带来的一些生物学意义。

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本文引用的文献

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Guanidine Hydrochloride-Induced Hepatitis B Virus Capsid Disassembly Hysteresis.盐酸胍诱导的乙型肝炎病毒衣壳解体滞后。
Biochemistry. 2024 Jun 18;63(12):1543-1552. doi: 10.1021/acs.biochem.4c00077. Epub 2024 May 24.
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Signal enhancement for two-dimensional cryo-EM data processing.二维冷冻电镜数据处理中的信号增强
Biol Imaging. 2023 Mar 9;3:e7. doi: 10.1017/S2633903X23000065. eCollection 2023.
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Recent advances in data collection for Cryo-EM methods.冷冻电镜方法的数据采集新进展。
Curr Opin Struct Biol. 2024 Jun;86:102795. doi: 10.1016/j.sbi.2024.102795. Epub 2024 Mar 13.

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