Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, Bangladesh.
Department of Genomics and Bioinformatics, Faculty of Biotechnology and Genetic Engineering, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, Bangladesh.
PLoS One. 2024 Sep 19;19(9):e0310398. doi: 10.1371/journal.pone.0310398. eCollection 2024.
The filarial worms of Wuchereria bancrofti are the primary cause of lymphatic filariasis (LF), a mosquito-borne disease among the neglected tropical parasitic diseases. Considering the global endemic consequences of the disease, there is a need to develop a successful vaccine candidate against LF. Using advanced immunoinformatics approaches, we designed two multiepitope vaccines targeting W. bancrofti's glutathione S-transferase and thioredoxin. Therefore, we predicted several MHC-1, MHC-2, and B-cell epitopes from these proteins and mapped two vaccine candidates (V1 and V2). The vaccines were subsequently employed for physicochemical analysis, structural prediction and validation, docking and normal mode analysis, codon optimization, and immune simulation. The selected MHC-1, MHC-2, and B-cell epitopes were antigenic without allergenicity or toxicity. The designed vaccines were expected to be soluble, stable proteins under physiological conditions. Compared to V2, V1's secondary and tertiary structures were simultaneously favorable, with Ramachandran plot analysis revealing 95.6% residues in favored areas. Subsequently, the molecular docking analysis indicated that the V1 had a high binding affinity for the TLR-2, TLR-4 and TLR-5, as suggested by the docking scores of -1248.7, -1038.5 and -1562.8, respectively. The NMA of these complexes further indicated their structural flexibility. Molecular dynamics simulations of V1-TLR complexes revealed V1-TLR-4 as the most stable, with the lowest free energy and minimal fluctuations, indicating the strongest binding affinity. The results of the codon optimization showed high levels of expression, with a favorable CAI score (<1.0). A three-dose vaccination analysis showed significant and persistent immunological responses, including adaptive and innate immune responses. The findings emphasize the potential of the V1 against W. bancrofti, but further validation is required through in vitro, in vivo, and clinical trials.
班氏丝虫的丝虫是淋巴丝虫病(LF)的主要病原体,淋巴丝虫病是一种被忽视的热带寄生虫病中的蚊媒病。考虑到该疾病的全球流行后果,需要开发针对 LF 的成功疫苗候选物。我们使用先进的免疫信息学方法,针对班氏丝虫的谷胱甘肽 S-转移酶和硫氧还蛋白设计了两种多表位疫苗。因此,我们从这些蛋白中预测了几个 MHC-1、MHC-2 和 B 细胞表位,并绘制了两种疫苗候选物(V1 和 V2)。随后对疫苗进行了理化分析、结构预测和验证、对接和正常模式分析、密码子优化和免疫模拟。选择的 MHC-1、MHC-2 和 B 细胞表位具有抗原性而没有变应原性或毒性。设计的疫苗在生理条件下预计是可溶的、稳定的蛋白质。与 V2 相比,V1 的二级和三级结构同时是有利的,Ramachandran 图谱分析显示 95.6%的残基处于有利区域。随后,分子对接分析表明,V1 与 TLR-2、TLR-4 和 TLR-5 具有高结合亲和力,其对接评分分别为-1248.7、-1038.5 和-1562.8。这些复合物的 NMA 进一步表明它们具有结构灵活性。V1-TLR 复合物的分子动力学模拟表明,V1-TLR-4 是最稳定的,具有最低的自由能和最小的波动,表明具有最强的结合亲和力。密码子优化的结果表明表达水平较高,CAI 评分(<1.0)良好。三剂量接种分析显示出显著且持久的免疫反应,包括适应性和固有免疫反应。研究结果强调了 V1 对班氏丝虫的潜力,但需要通过体外、体内和临床试验进一步验证。