Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China; Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China.
Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China; Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China; School of Life Sciences, Huaiyin Normal University, Huaian, 223300, China.
Environ Res. 2024 Dec 15;263(Pt 1):120006. doi: 10.1016/j.envres.2024.120006. Epub 2024 Sep 18.
The impacts of transgenic crops on soil microbiology and fertility are critical in determining their biosafety. While transgenic crops can alter soil microbes, their effects are often context-dependent; therefore, the ecological importance of these changes remains a topic of ongoing research. Using high-throughput sequencing, we investigated the effects of Bacillus thuringiensis (Bt) maize expressing the mcry1Ab and mcry2Ab genes (2A7) on soil nutrient dynamics, as well as the diversity and function of soil microbial communities, including bacteria and fungi, within different soil compartments. Our findings revealed a plant-shaped rhizosphere (RS) microbial community as a result of the selective recruitment of microorganisms from the surrounding environment. The transgene insertion had a significant impact on the RS niche, and several species eventually became associated with Z58 and 2A7 plants. For example, Neocosmospora rubicola fungal and Pantoea dispersa bacterial microorganisms were significantly decreased in the dual Bt-transgenic 2A7 rhizosphere but enriched in the Z58 rhizospheres. The activity of soil enzymes such as urease, invertase, and alkaline phosphatase was boosted by Bt-transgenic 2A7. LefSe analysis identified significant bacterial and fungal biomarker species that were responsible for the differential effects of Bt-transgenic 2A7 and control Z58 within rhizosphere soils. Mantel analysis further demonstrated that the root exudates of 2A7 altered nutrient-acquisition enzymes by influencing biomarker taxa. PICRUSt2 functional characterization revealed a significantly higher abundance of the phosphate-starvation-inducible protein in control Z58 than in Bt-transgenic 2A7. Furthermore, taxonomy, alpha (Shannon diversity), and beta diversity analyses all revealed niche-driven microbial profile differentiation. Niche partitioning also had a significant impact on N- and P-related COGs as well. Our findings suggests that Bt-transgenic 2A7 modulates rhizosphere microbial communities by affecting biomarker taxa and soil enzyme activity. These findings will promote sustainable agriculture practices by advancing our knowledge of the ecological effects of Bt crops on soil microbial communities.
转生物技术对土壤微生物学和肥力的影响在确定其生物安全性方面至关重要。虽然转生物技术可以改变土壤微生物,但它们的影响通常取决于具体情况,因此,这些变化的生态重要性仍然是一个正在研究的课题。本研究采用高通量测序技术,研究了表达 mcry1Ab 和 mcry2Ab 基因(2A7)的苏云金芽孢杆菌(Bt)玉米对土壤养分动态以及包括细菌和真菌在内的不同土壤区系土壤微生物群落多样性和功能的影响。我们的研究结果表明,由于从周围环境中选择性招募微生物,形成了具有植物形状的根际(RS)微生物群落。转基因插入对 RS 生态位有显著影响,最终有几个物种与 Z58 和 2A7 植物相关。例如,Neocospora rubicola 真菌和 Pantoea dispersa 细菌在双 Bt-转基 2A7 根际中显著减少,但在 Z58 根际中丰富。Bt-转基 2A7 还促进了土壤酶(如脲酶、转化酶和碱性磷酸酶)的活性。 LefSe 分析确定了负责 Bt-转基 2A7 和对照 Z58 在根际土壤中产生差异影响的显著细菌和真菌生物标志物。Mantel 分析进一步表明,2A7 的根分泌物通过影响生物标志物分类群来改变养分获取酶。PICRUSt2 功能特征表明,对照 Z58 中磷酸盐饥饿诱导蛋白的丰度明显高于 Bt-转基 2A7。此外,分类学、α(香农多样性)和β多样性分析都揭示了基于生态位的微生物特征分化。生态位分隔对与 N 和 P 相关的 COGs 也有显著影响。本研究表明,Bt-转基 2A7 通过影响生物标志物分类群和土壤酶活性来调节根际微生物群落。这些发现将通过提高我们对 Bt 作物对土壤微生物群落的生态影响的认识,促进可持续农业实践。