Khan Afreen, Zubair Swaleha, Shuaib Mohammed, Sheneamer Abdullah, Alam Shadab, Assiri Basem
Department of Computer Application, Faculty of Engineering & IT, Integral University, Lucknow, India.
Department of Computer Science, Faculty of Science, Aligarh Muslim University, Aligarh, India.
Front Neurosci. 2024 Sep 6;18:1391465. doi: 10.3389/fnins.2024.1391465. eCollection 2024.
Machine learning (ML) algorithms and statistical modeling offer a potential solution to offset the challenge of diagnosing early Alzheimer's disease (AD) by leveraging multiple data sources and combining information on neuropsychological, genetic, and biomarker indicators. Among others, statistical models are a promising tool to enhance the clinical detection of early AD. In the present study, early AD was diagnosed by taking into account characteristics related to whether or not a patient was taking specific drugs and a significant protein as a predictor of Amyloid-Beta (Aβ), tau, and ptau [AT(N)] levels among participants.
In this study, the optimization of predictive models for the diagnosis of AD pathologies was carried out using a set of baseline features. The model performance was improved by incorporating additional variables associated with patient drugs and protein biomarkers into the model. The diagnostic group consisted of five categories (cognitively normal, significant subjective memory concern, early mildly cognitively impaired, late mildly cognitively impaired, and AD), resulting in a multinomial classification challenge. In particular, we examined the relationship between AD diagnosis and the use of various drugs (calcium and vitamin D supplements, blood-thinning drugs, cholesterol-lowering drugs, and cognitive drugs). We propose a hybrid-clinical model that runs multiple ML models in parallel and then takes the majority's votes, enhancing the accuracy. We also assessed the significance of three cerebrospinal fluid biomarkers, Aβ, tau, and ptau in the diagnosis of AD. We proposed that a hybrid-clinical model be used to simulate the MRI-based data, with five diagnostic groups of individuals, with further refinement that includes preclinical characteristics of the disorder. The proposed design builds a Meta-Model for four different sets of criteria. The set criteria are as follows: to diagnose from baseline features, baseline and drug features, baseline and protein features, and baseline, drug and protein features.
We were able to attain a maximum accuracy of 97.60% for baseline and protein data. We observed that the constructed model functioned effectively when all five drugs were included and when any single drug was used to diagnose the response variable. Interestingly, the constructed Meta-Model worked well when all three protein biomarkers were included, as well as when a single protein biomarker was utilized to diagnose the response variable.
It is noteworthy that we aimed to construct a pipeline design that incorporates comprehensive methodologies to detect Alzheimer's over wide-ranging input values and variables in the current study. Thus, the model that we developed could be used by clinicians and medical experts to advance Alzheimer's diagnosis and as a starting point for future research into AD and other neurodegenerative syndromes.
机器学习(ML)算法和统计建模提供了一种潜在的解决方案,通过利用多个数据源并整合神经心理学、遗传学和生物标志物指标等信息,来应对早期阿尔茨海默病(AD)诊断的挑战。其中,统计模型是增强早期AD临床检测的一种有前景的工具。在本研究中,通过考虑与患者是否服用特定药物以及一种重要蛋白质相关的特征,将其作为参与者中淀粉样蛋白-β(Aβ)、tau蛋白和磷酸化tau蛋白[AT(N)]水平的预测指标,来诊断早期AD。
在本研究中,利用一组基线特征对AD病理诊断的预测模型进行了优化。通过将与患者药物和蛋白质生物标志物相关的额外变量纳入模型,提高了模型性能。诊断组包括五个类别(认知正常、有明显主观记忆问题、早期轻度认知障碍、晚期轻度认知障碍和AD),这带来了一个多项分类挑战。具体而言,我们研究了AD诊断与各种药物(钙和维生素D补充剂、血液稀释药物、降胆固醇药物和认知药物)使用之间的关系。我们提出了一种混合临床模型,该模型并行运行多个ML模型,然后进行多数投票,提高了准确性。我们还评估了三种脑脊液生物标志物Aβ、tau蛋白和磷酸化tau蛋白在AD诊断中的意义。我们建议使用混合临床模型来模拟基于MRI的数据,针对五个诊断组的个体,并进一步细化以纳入该疾病的临床前特征。所提出的设计为四种不同的标准集构建了一个元模型。设定的标准如下:根据基线特征进行诊断、根据基线和药物特征进行诊断、根据基线和蛋白质特征进行诊断以及根据基线、药物和蛋白质特征进行诊断。
对于基线和蛋白质数据,我们能够达到97.60%的最高准确率。我们观察到,当纳入所有五种药物以及使用任何一种单一药物来诊断反应变量时,构建的模型都能有效发挥作用。有趣的是,当纳入所有三种蛋白质生物标志物以及使用单一蛋白质生物标志物来诊断反应变量时,构建的元模型也运行良好。
值得注意的是,在当前研究中,我们旨在构建一种管道设计,该设计纳入了全面的方法,以在广泛的输入值和变量范围内检测阿尔茨海默病。因此,我们开发的模型可供临床医生和医学专家用于推进阿尔茨海默病的诊断,并作为未来对AD和其他神经退行性综合征研究的起点。