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一种与人类尿调节蛋白和GP2具有序列相似性的斑马鱼基因在硬骨鱼中表现出广泛的进化多样性,并赋予对细菌感染的抗性。

A zebrafish gene with sequence similarities to human uromodulin and GP2 displays extensive evolutionary diversification among teleost and confers resistance to bacterial infection.

作者信息

Naruoka Shiori, Sakata Souhei, Kawabata Shigeru, Hashiguchi Yasuyuki, Daikoku Eriko, Sakaguchi Shoichi, Okazaki Fumiyoshi, Yoshikawa Kento, Rawls John F, Nakano Takashi, Hirose Yoshinobu, Ono Fumihito

机构信息

Department of Physiology, Faculty of Medicine, Osaka Medical and Pharmaceutical University, Japan.

Department of Pathology, Faculty of Medicine, Osaka Medical and Pharmaceutical University, Japan.

出版信息

Heliyon. 2024 Sep 6;10(18):e37510. doi: 10.1016/j.heliyon.2024.e37510. eCollection 2024 Sep 30.

Abstract

In the process of investigating synaptic changes happening to mutants lacking postsynaptic receptors in the neuromuscular junction, we focused on a hitherto uncharacterized zebrafish gene whose expression was increased in the RNAseq and droplet digital PCR (ddPCR) analysis of a paralyzed mutant . The gene which we named showed amino acid sequence similarity to human and , which are expressed in epithelial cells of the kidney and the gut respectively and bind to bacteria pili. had 14 paralogues in a ∼400 KB region on the chromosome 12 of the zebrafish genome. These genes, named through , constitute a gene cluster which presumably arose from recent gene duplications in the zebrafish lineage. An antibody raised against the epitope common to 6-9 genes in the family revealed expression in the cloaca of 1 day post fertilization (dpf) embryos which broadened to the urinary and digestive tracts by 5 dpf. Expression of was increased by exposure of embryos to . Survival of mutant embryos was shortened in the presence of , or when they were not maintained in germ-free conditions. Adults mutants also exhibited susceptibility to infection. Other teleost species which had -like genes in their genomes showed a range of gene duplication, resulting in clusters of 1 to >15 -like genes. We hereby identified a new gene family specific to teleost that include a microbial induced gene which confers resistance to bacterial infection.

摘要

在研究神经肌肉接头中缺乏突触后受体的突变体所发生的突触变化过程中,我们聚焦于一个此前未被表征的斑马鱼基因,该基因在一个瘫痪突变体的RNA测序和液滴数字PCR(ddPCR)分析中表达增加。我们命名的这个基因与人类的[基因名称1]和[基因名称2]显示出氨基酸序列相似性,它们分别在肾脏和肠道的上皮细胞中表达并与细菌菌毛结合。[该基因名称]在斑马鱼基因组12号染色体上约400KB的区域内有14个旁系同源基因。这些基因,从[基因名称3]到[基因名称16]命名,构成了一个基因簇,推测是由斑马鱼谱系中近期的基因复制产生的。针对[该基因家族中6 - 9个基因共有的表位]产生的抗体显示,在受精后1天(dpf)胚胎的泄殖腔中有表达,到5 dpf时扩展到泌尿和消化道。胚胎暴露于[某种物质]会增加[该基因名称]的表达。在存在[某种物质]的情况下,或者当它们不是在无菌条件下饲养时,[该基因名称]突变体胚胎的存活时间缩短。成年[该基因名称]突变体也表现出对感染的易感性。基因组中具有[该基因名称]样基因的其他硬骨鱼物种显示出一系列的基因复制,导致1到>15个[该基因名称]样基因的簇。我们在此鉴定出一个硬骨鱼特有的新基因家族,其中包括一个赋予对细菌感染抗性的微生物诱导基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/376c/11415648/744d38e35499/gr1.jpg

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