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基因转录与DNA修复之间DSB转运调控的信号灯。

Traffic light at DSB-transit regulation between gene transcription and DNA repair.

作者信息

Modafferi Stefania, Esposito Francesca, Tavella Sara, Gioia Ubaldo, Francia Sofia

机构信息

Istituto di Genetica Molecolare "Luigi Luca Cavalli Sforza"- Consiglio Nazionale delle Ricerche, Pavia, Italy.

PhD Program in Biomolecular Sciences and Biotechnology (SBB), Istituto Universitario di Studi Superiori (IUSS), Pavia, Italy.

出版信息

FEBS Lett. 2025 Jan;599(2):177-189. doi: 10.1002/1873-3468.15024. Epub 2024 Sep 27.

DOI:10.1002/1873-3468.15024
PMID:39333024
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11771567/
Abstract

Transcription of actively expressed genes is dampened for kilobases around DNA lesions via chromatin modifications. This is believed to favour repair and prevent genome instability. Nonetheless, mounting evidence suggests that transcription may be induced by DNA breakage, resulting in the local de novo synthesis of non-coding RNAs (ncRNAs). Such transcripts have been proposed to play important functions in both DNA damage signalling and repair. Here, we review the recently identified mechanistic details of transcriptional silencing at damaged chromatin, highlighting how post-translational histone modifications can also be modulated by the local synthesis of DNA damage-induced ncRNAs. Finally, we envision that these entangled transcriptional events at DNA breakages can be targeted to modulate DNA repair, with potential implications for locus-specific therapeutic strategies.

摘要

通过染色质修饰,活跃表达基因的转录在DNA损伤周围的数千碱基范围内受到抑制。这被认为有利于修复并防止基因组不稳定。然而,越来越多的证据表明,转录可能由DNA断裂诱导,导致非编码RNA(ncRNA)的局部从头合成。此类转录本被认为在DNA损伤信号传导和修复中均发挥重要作用。在此,我们综述了受损染色质转录沉默的最新机制细节,强调了翻译后组蛋白修饰如何也能被DNA损伤诱导的ncRNA的局部合成所调节。最后,我们设想DNA断裂处这些相互关联的转录事件可作为靶点来调节DNA修复,这对位点特异性治疗策略具有潜在意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/11771567/280369de8bf8/FEB2-599-177-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/11771567/aeeba10a4fbc/FEB2-599-177-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/11771567/280369de8bf8/FEB2-599-177-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/11771567/aeeba10a4fbc/FEB2-599-177-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/11771567/280369de8bf8/FEB2-599-177-g001.jpg

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本文引用的文献

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Death Induced by Survival gene Elimination (DISE) correlates with neurotoxicity in Alzheimer's disease and aging.生存基因消除导致的死亡(DISE)与阿尔茨海默病和衰老中的神经毒性相关。
Nat Commun. 2024 Jan 18;15(1):264. doi: 10.1038/s41467-023-44465-8.
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Nucleolar detention of NONO shields DNA double-strand breaks from aberrant transcripts.核仁扣留 NONO 可防止 DNA 双链断裂与异常转录本结合。
Nucleic Acids Res. 2024 Apr 12;52(6):3050-3068. doi: 10.1093/nar/gkae022.
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Alternative lengthening of telomeres (ALT) cells viability is dependent on C-rich telomeric RNAs.
端粒的替代性延长(ALT)细胞的存活依赖于富含 C 的端粒 RNA。
Nat Commun. 2023 Nov 4;14(1):7086. doi: 10.1038/s41467-023-42831-0.
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BMI1 fine-tunes gene repression and activation to safeguard undifferentiated spermatogonia fate.BMI1微调基因抑制和激活以保障未分化精原细胞的命运。
Front Cell Dev Biol. 2023 Apr 24;11:1146849. doi: 10.3389/fcell.2023.1146849. eCollection 2023.
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DNA damage triggers squamous metaplasia in human lung and mammary cells via mitotic checkpoints.DNA损伤通过有丝分裂检查点触发人肺和乳腺细胞的鳞状化生。
Cell Death Discov. 2023 Jan 21;9(1):21. doi: 10.1038/s41420-023-01330-3.
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The splanchnic mesenchyme is the tissue of origin for pancreatic fibroblasts during homeostasis and tumorigenesis.内脏间充质是正常生理状态和肿瘤发生过程中胰腺成纤维细胞的组织来源。
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The Chromatin Landscape Channels DNA Double-Strand Breaks to Distinct Repair Pathways.染色质景观将DNA双链断裂导向不同的修复途径。
Front Cell Dev Biol. 2022 Jun 8;10:909696. doi: 10.3389/fcell.2022.909696. eCollection 2022.
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The histone chaperone FACT: a guardian of chromatin structure integrity.组蛋白伴侣FACT:染色质结构完整性的守护者。
Transcription. 2022 Feb-Jun;13(1-3):16-38. doi: 10.1080/21541264.2022.2069995. Epub 2022 Apr 29.
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