Biotherapy Unit, IRCCS San Martino, 16132 Genoa, Italy.
Clinical Bioinformatics Unit, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.
Genes (Basel). 2024 Aug 24;15(9):1117. doi: 10.3390/genes15091117.
Germline variants in the NSD1 gene are responsible for Sotos syndrome, while somatic variants promote neoplastic cell transformation. Our previous studies revealed three alternative RNA isoforms of present in fibroblast cell lines (FBs): the canonical full transcript and 2 alternative transcripts, termed AT2 (NSD1 Δ5Δ7) and AT3 ( Δ19-23 at the 5' end). The precise molecular pathways affected by each specific isoform of are uncharacterized to date. To elucidate the role of these isoforms, their expression was suppressed by siRNA knockdown in FBs and protein expression and transcriptome data was explored. We demonstrate that one gene target of isoform AT2 is ARP3 actin-related protein 3 homolog B (). We show that loss of both canonical and AT2 isoforms impaired the ability of fibroblasts to regulate the actin cytoskeleton, and we observed that this caused selective loss of stress fibers. Our findings provide novel insights into function by distinguishing isoform function and demonstrating an essential role of in regulating the actin cytoskeleton and stress fiber formation in fibroblasts.
NSD1 基因中的种系变异可导致 Sotos 综合征,而体细胞变异则促进肿瘤细胞转化。我们之前的研究表明,在成纤维细胞系(FB)中存在 的三种替代 RNA 异构体:规范的全长转录本和 2 种替代转录本,称为 AT2(NSD1 Δ5Δ7)和 AT3(5'端 Δ19-23)。迄今为止,每种特定的 异构体所影响的精确分子途径尚不清楚。为了阐明这些异构体的作用,我们通过 siRNA 敲低在 FB 中抑制它们的表达,并探索蛋白表达和转录组数据。我们证明, 异构体 AT2 的一个靶基因是 ARP3 肌动蛋白相关蛋白 3 同源物 B ()。我们表明,丧失规范的 和 AT2 异构体均削弱了成纤维细胞调节肌动蛋白细胞骨架的能力,并且我们观察到这导致了应激纤维的选择性丧失。我们的发现通过区分异构体的功能并证明 在调节成纤维细胞中的肌动蛋白细胞骨架和应激纤维形成中的重要作用,为 的功能提供了新的见解。