从[来源]中分离、表征和对羊毛桦酸进行单晶X射线分析:对人血清白蛋白(HSA)和牛血清白蛋白(BSA)结合相互作用的深入了解及计算机模拟研究

Isolation, Characterization, and Single-Crystal X-ray Analysis of Lantabetulic Acid from : Insights into HSA and BSA Binding Interactions, with In-Silico Study.

作者信息

Parveen Mehtab, Khan Azmat Ali, Nami Shahab A A, Kataria Ramesh, Malik Abdul, Amali Nurul Afiqah Muhammad, Abd Kadir Nurul Huda, Alam Mahboob

机构信息

Department of Chemistry, Aligarh Muslim University, Aligarh 202002, India.

Pharmaceutical Biotechnology Laboratory, Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia.

出版信息

ACS Omega. 2024 Sep 12;9(38):39484-39502. doi: 10.1021/acsomega.4c03406. eCollection 2024 Sep 24.

Abstract

This study investigated the bioactive potential of , a plant known for its rich phytochemicals. A previously unreported compound was isolated from and characterized using various spectroscopic techniques (IR, UV, NMR, MS) and confirmed for the first time by X-ray crystallography. In isolated compound 1, noncovalent interactions between H···H/H···H, C···C/C···C and O···H/H···O play a major role in its packing arrangement. This observation is consistent with the results of Hirshfeld surface analysis, which quantified these interactions as 14.2%, 84.6%, and 1.2%, respectively. The isolated compound was identified as lantabetulic acid () (3β,25-expoxy-3α-hydroxylup-20(29)-en-28-oic acid). To understand its potential biological interactions, the binding affinity of lantabetulic acid to biomolecules such as bovine serum albumin (BSA), and human serum albumin (HSA), was assessed. The results showed significant binding efficacy, indicating potential interactions with these molecules. Furthermore, the DPPH assay demonstrated the potent antioxidant activity of this compound. We used in silico molecular docking to clarify the binding affinity between lantabetulic acid and a particular receptor. Furthermore, molecular dynamic simulation studies also explored the binding interaction. As well, MM/GBSA calculations corroborate the simulation results and the stability of the complex. Docking and dynamics studies revealed promising binding scores, suggesting further investigation into their potential therapeutic applications. Geometric parameters and the absorption spectrum of compound 1 were also determined using the DFT approach and compared with experimental findings.

摘要

本研究调查了一种以富含植物化学物质而闻名的植物的生物活性潜力。从该植物中分离出一种先前未报道的化合物,并使用各种光谱技术(红外光谱、紫外光谱、核磁共振光谱、质谱)对其进行表征,首次通过X射线晶体学得到证实。在分离出的化合物1中,H···H/H···H、C···C/C···C和O···H/H···O之间的非共价相互作用在其堆积排列中起主要作用。这一观察结果与 Hirshfeld 表面分析的结果一致,该分析将这些相互作用分别量化为14.2%、84.6%和1.2%。分离出的化合物被鉴定为lantabetulic acid()(3β,25 -环氧-3α-羟基羽扇-20(29)-烯-28-酸)。为了解其潜在的生物相互作用,评估了lantabetulic acid与牛血清白蛋白(BSA)和人血清白蛋白(HSA)等生物分子的结合亲和力。结果显示出显著的结合效果,表明与这些分子存在潜在相互作用。此外,DPPH 测定法证明了该化合物具有强大的抗氧化活性。我们使用计算机模拟分子对接来阐明lantabetulic acid与特定受体之间的结合亲和力。此外,分子动力学模拟研究也探索了结合相互作用。同样,MM/GBSA计算证实了模拟结果以及复合物的稳定性。对接和动力学研究揭示了有前景的结合分数,表明需进一步研究它们的潜在治疗应用。还使用密度泛函理论(DFT)方法确定了化合物1的几何参数和吸收光谱,并与实验结果进行了比较。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f30f/11425619/7a47bec36e81/ao4c03406_0001.jpg

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