Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.
Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.
Biochemistry. 2024 Oct 15;63(20):2580-2593. doi: 10.1021/acs.biochem.4c00446. Epub 2024 Oct 3.
As a traceless, bioreversible modification, the esterification of carboxyl groups in peptides and proteins has the potential to increase their clinical utility. An impediment is the lack of strategies to quantify esterase-catalyzed hydrolysis rates for esters in esterified biologics. We have developed a continuous Förster resonance energy transfer (FRET) assay for esterase activity based on a peptidic substrate and a protease, Glu-C, that cleaves a glutamyl peptide bond only if the glutamyl side chain is a free acid. Using pig liver esterase (PLE) and human carboxylesterases, we validated the assay with substrates containing simple esters (, ethyl) and esters designed to be released by self-immolation upon quinone methide elimination. We found that simple esters were not cleaved by esterases, likely for steric reasons. To account for the relatively low rate of quinone methide elimination, we extended the mathematics of the traditional Michaelis-Menten model to conclude with a first-order intermediate decay step. By exploring two regimes of our substrate → intermediate → product (SIP) model, we evaluated the rate constants for the PLE-catalyzed cleavage of an ester on a glutamyl side chain (/ = 1.63 × 10 M s) and subsequent spontaneous quinone methide elimination to regenerate the unmodified peptide ( = 0.00325 s; = 3.55 min). The detection of esterase activity was also feasible in the human intestinal S9 fraction. Our assay and SIP model increase the understanding of the release kinetics of esterified biologics and facilitate the rational design of efficacious peptide prodrugs.
作为一种无痕、生物可逆的修饰方式,羧基的酯化可以提高肽和蛋白质的临床应用价值。但目前缺乏定量分析酯化生物制剂中酯酶催化水解速率的策略,这成为了一个障碍。我们开发了一种基于肽底物和 Glu-C 蛋白酶的连续荧光共振能量转移(FRET)酯酶活性测定法,只有当谷氨酸侧链为游离酸时,Glu-C 才能切割谷氨酸肽键。我们使用猪肝酯酶(PLE)和人羧酸酯酶对该测定法进行了验证,底物中包含简单酯(乙酯)和设计为通过醌亚甲基消除自焚烧释放的酯。我们发现,由于空间位阻,简单酯类不能被酯酶切割。为了解释醌亚甲基消除的相对低速率,我们扩展了传统米氏-门坦模型的数学原理,以包含一级中间衰减步骤。通过探索我们的底物→中间产物→产物(SIP)模型的两个区域,我们评估了 PLE 催化在谷氨酸侧链上切割酯的速率常数(/ = 1.63×10 M s)和随后自发的醌亚甲基消除以再生未修饰的肽(/ = 0.00325 s;/ = 3.55 min)。在人肠道 S9 级分中也可以检测到酯酶活性。我们的测定法和 SIP 模型增加了对酯化生物制剂释放动力学的理解,并有助于合理设计有效的肽前药。