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从在印度患病的槟榔棕榈(Areca catechu L.)中发现一种新型的槟榔甲型肝炎样病毒,到通过数据挖掘在蜜蜂和植物转录组中鉴定出已知和新型的槟榔甲型肝炎样病毒。

From the discovery of a novel arepavirus in diseased arecanut palms (Areca catechu L.) in India to the identification of known and novel arepaviruses in bee and plant transcriptomes through data-mining.

机构信息

ICAR-Central Plantation Crops Research Institute (ICAR-CPCRI) Regional Station, Vittal, Karnataka, India.

Division of Genetics and Tree Improvement, ICFRE-Institute of Forest Biodiversity (IFB), Hyderabad, India.

出版信息

Virology. 2024 Dec;600:110256. doi: 10.1016/j.virol.2024.110256. Epub 2024 Oct 2.

Abstract

Arecanut palm is a commercially important plantation crop valued for its nut. In this investigation, we report the discovery of a putative novel arepavirus, named areca palm necrotic ringspot virus 2 (ANRSV2), in necrotic ringspot diseased areca palms in Bantwal, Dakshina Kannada, Karnataka, India through RNA-sequencing and transmission electron microscopy. Further, the presence of ANRSV2 in the diseased samples was confirmed through reverse transcriptase-polymerase chain reaction assays. In addition, by mining public domain transcriptome data for arepaviral sequences, we identified a putative novel arepavirus in Psychotria rubra, a non-palm host. We recovered the genome sequences of the areca palm necrotic ringspot virus in honey bees, tomato, Onobrychis viciifolia, and Rhamnus heterophylla. These findings broaden our comprehension of arepaviral diversity and host range, and suggest an intriguing possibility of pollen-mediated arepaviral transmission that necessitates empirical validation. Further studies are needed to understand the biology of identified putative novel arepaviruses.

摘要

槟榔是一种具有商业重要性的经济作物,以其坚果而闻名。在本研究中,我们通过 RNA 测序和透射电子显微镜,在印度卡纳塔克邦班图尔的患有坏死环斑病的槟榔中发现了一种假定的新型槟榔坏死环斑病毒 2(ANRSV2)。此外,通过逆转录聚合酶链反应检测,证实了 ANRSV2 存在于患病样本中。此外,通过挖掘公共领域转录组数据中的槟榔病毒序列,我们在非槟榔宿主Psychotria rubra 中鉴定到了一种假定的新型槟榔病毒。我们从蜜蜂蜜蜂、番茄、Onobrychis viciifolia 和 Rhamnus heterophylla 中分离到了槟榔坏死环斑病毒的基因组序列。这些发现拓宽了我们对槟榔病毒多样性和宿主范围的理解,并暗示了花粉介导的槟榔病毒传播的有趣可能性,这需要进行实证验证。需要进一步的研究来了解鉴定出的假定新型槟榔病毒的生物学特性。

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