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微生物对北极生物结皮季节性变化的响应,重点关注真菌和蓝细菌。

Microbial response to seasonal variation in arctic biocrusts with a focus on fungi and cyanobacteria.

机构信息

Department of Biology, Botanical Institute, University of Cologne, Zulpicher Str. 47B, 50674 Cologne, Germany.

Department of Ecology, Faculty of Science, Charles University, Viničná 7, 128 44 Prague 2, Czech Republic; Institute of Botany, Academy of Sciences of the Czech Republic, Dukelská 135, 37982 Třeboň, Czech Republic.

出版信息

Environ Res. 2024 Dec 15;263(Pt 2):120110. doi: 10.1016/j.envres.2024.120110. Epub 2024 Oct 5.

Abstract

Biocrusts are crucial components of Arctic ecosystems, playing significant roles in carbon and nitrogen cycling, especially in regions where plant growth is limited. However, the microbial communities within Arctic biocrusts and their strategies for surviving the harsh conditions remain poorly understood. In this study, the microbial profiles of Arctic biocrusts across different seasons (summer, autumn, and winter) were investigated in order to elucidate their survival strategies in extreme conditions. Metagenomic and metatranscriptomic analyses revealed significant differences in microbial community composition among the sites located in different elevations. The bacterial communities were dominated by Actinobacteria and Proteobacteria, while the fungal communities were mainly represented by Ascomycota and Basidiomycota, with lichenized and saprotrophic traits prevailing. Cyanobacteria were primarily composed of heterocystous cyanobacteria. Furthermore, the study identified molecular mechanisms underlying cold adaptation, including the expression of heat shock proteins and cold-inducible RNA helicases in cyanobacteria and fungi. Overall, the microbial communities appear to be permanently well adapted to the extreme environment.

摘要

生物结皮是北极生态系统的重要组成部分,在碳氮循环中发挥着重要作用,尤其是在植物生长受限的地区。然而,北极生物结皮中的微生物群落及其应对恶劣条件的生存策略仍知之甚少。在这项研究中,我们调查了不同季节(夏季、秋季和冬季)的北极生物结皮中的微生物特征,以阐明它们在极端条件下的生存策略。宏基因组和宏转录组分析揭示了不同海拔高度的地点之间微生物群落组成的显著差异。细菌群落主要由放线菌门和变形菌门组成,而真菌群落主要由子囊菌门和担子菌门组成,其中地衣和腐生特性占主导地位。蓝细菌主要由异形胞蓝细菌组成。此外,该研究还确定了冷适应的分子机制,包括蓝细菌和真菌中热休克蛋白和冷诱导 RNA 解旋酶的表达。总的来说,微生物群落似乎已经永久适应了极端环境。

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