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用于自动分类物候期和识别 属杂交种总状花序的高分辨率图像数据集。

High-resolution image dataset for the automatic classification of phenological stage and identification of racemes in spp. hybrids.

作者信息

Arrechea-Castillo Darwin Alexis, Espitia-Buitrago Paula, Arboleda Ronald David, Hernandez Luis Miguel, Jauregui Rosa N, Cardoso Juan Andrés

机构信息

International Center for Tropical Agriculture (CIAT), A.A. 6713, Km 17 recta Cali-Palmira, Palmira, Colombia.

出版信息

Data Brief. 2024 Sep 13;57:110928. doi: 10.1016/j.dib.2024.110928. eCollection 2024 Dec.

DOI:10.1016/j.dib.2024.110928
PMID:39376481
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11456779/
Abstract

grasses are widely used forages in the Neotropics and are gaining importance in other regions due to their role in meeting the increasing global demand for sustainable agricultural practices. High-throughput phenotyping (HTP) is important for accelerating breeding programs focused on improving forage and seed yield. While RGB imaging has been used for HTP of vegetative traits, the assessment of phenological stages and seed yield using image analysis remains unexplored in this genus. This work presents a dataset of 2,400 high-resolution RGB images of 200 hybrid genotypes, captured over seven months and covering both vegetative and reproductive stages. Images were manually labelled as vegetative or reproductive, and a subset of 255 reproductive stage images were annotated to identify 22,340 individual racemes. This dataset enables the development of machine learning and deep learning models for automated phenological stage classification and raceme identification, facilitating HTP and accelerated breeding of spp. hybrids with high seed yield potential.

摘要

禾本科植物是新热带地区广泛使用的饲料,由于其在满足全球对可持续农业实践日益增长的需求方面所起的作用,在其他地区也越来越重要。高通量表型分析(HTP)对于加速专注于提高饲料和种子产量的育种计划很重要。虽然RGB成像已用于营养性状的HTP,但利用图像分析评估物候期和种子产量在该属中仍未得到探索。这项工作展示了一个数据集,包含200个杂交基因型的2400张高分辨率RGB图像,这些图像在七个月内拍摄,涵盖营养和生殖阶段。图像被手动标记为营养或生殖,并且对255个生殖阶段图像的一个子集进行注释以识别22340个单个总状花序。该数据集能够开发用于自动物候期分类和总状花序识别的机器学习和深度学习模型,促进具有高种子产量潜力的 spp. 杂交种的HTP和加速育种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/cfbaad5705e7/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/69c42df72bea/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/4259a949533c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/13f40ea1e09a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/d88fddb4ca9a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/f801cd08230c/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/a02631b41a4a/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/cfbaad5705e7/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/69c42df72bea/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/4259a949533c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/13f40ea1e09a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/d88fddb4ca9a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/f801cd08230c/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/a02631b41a4a/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d76/11456779/cfbaad5705e7/gr7.jpg

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