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α-突触核蛋白四聚体在生物界面的构象选择。

Conformational Selection of α-Synuclein Tetramers at Biological Interfaces.

机构信息

Department of Physics, Bernal Institute, University of Limerick, Limerick V94 T9PX, Ireland.

UK Dementia Research Institute, University College London, London WC1E6BT, U.K.

出版信息

J Chem Inf Model. 2024 Oct 28;64(20):8010-8023. doi: 10.1021/acs.jcim.4c01459. Epub 2024 Oct 8.

Abstract

Controlling the polymorphic assemblies of α-synuclein (αS) oligomers is crucial to reroute toxic protein aggregation implicated in Parkinson's disease (PD). One potential mediator is the interaction of αS tetramers with cell membranes, which may regulate the dynamic balance between aggregation-prone disordered monomers and aggregation-resistant helical tetramers. Here, we model diverse tetramer-cell interactions and compare the structure-function relations at the supramolecular-biological interface with available experimental data. The models predict preferential interaction of compact αS tetramers with highly charged membrane surfaces, which may further stabilize this aggregation-resistant conformer. On moderately charged membranes, extended structures are preferred. In addition to surface charge, curvature influences tetramer thermodynamic stability and aggregation, with potential for selective isolation of tetramers regio-specific interactions with strongly negatively charged micelles that screen further aggregation. Our modeling data set highlights diverse beneficial nano-bio interactions to redirect biomolecule assembly, supporting new therapeutic approaches for PD based on lipid-mediated conformational selection and inhibition.

摘要

控制α-突触核蛋白(αS)寡聚物的多态组装对于重路由帕金森病(PD)中涉及的毒性蛋白聚集至关重要。一种潜在的介导物是αS 四聚体与细胞膜的相互作用,它可能调节倾向于聚集的无序单体和抗聚集的螺旋四聚体之间的动态平衡。在这里,我们模拟了不同的四聚体-细胞相互作用,并将超分子-生物界面的结构-功能关系与现有实验数据进行了比较。这些模型预测,紧凑的 αS 四聚体与带高电荷的膜表面优先相互作用,这可能进一步稳定这种抗聚集构象。在带中等电荷的膜上,优先选择扩展结构。除了表面电荷外,曲率还影响四聚体的热力学稳定性和聚集,具有选择性分离四聚体的潜力,其与带强负电荷胶束的区域特异性相互作用可以阻止进一步聚集。我们的建模数据集突出了多种有益的纳米生物相互作用,以重新引导生物分子组装,为基于脂质介导的构象选择和抑制的 PD 提供新的治疗方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11a9/11523075/55d42d0e6e08/ci4c01459_0001.jpg

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