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干旱胁迫下CRN-3505玉米品种根际土壤数据的宏基因组组装与注释

Metagenome assembly and annotation of data from the rhizosphere soil of drought-stressed CRN-3505 maize cultivar.

作者信息

Babalola Olubukola O, Molefe Rebaona R, Amoo Adenike E

机构信息

Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Private Bag X2046, Mmabatho 2735, South Africa.

Department of Biology, Edge Hill University, Ormskirk, United Kingdom.

出版信息

Data Brief. 2024 Sep 21;57:110966. doi: 10.1016/j.dib.2024.110966. eCollection 2024 Dec.

Abstract

This data article reports shotgun metagenomic data obtained from drought-stressed maize rhizosphere through the Illumina Novaseq platform, utilizing the KBase online platform. 428,339,852 high-quality post-sequences were obtained, showcasing an average GC content of 65.45 %. The investigation, conducted at Molelwane farm in Mafikeng, South Africa, identified 13 metagenome-assembled genomes (MAGs). Functional annotation of these MAGs revealed their involvement in essential plant growth and development functions, such as sulfur and nitrogen metabolism. The dataset was deposited into the NCBI database, and MAGs accessions are available at DDBJ/ENA/GenBank under the accession number PRJNA101755.

摘要

本数据文章报告了通过Illumina Novaseq平台利用KBase在线平台从干旱胁迫的玉米根际获得的鸟枪法宏基因组数据。获得了428,339,852条高质量的测序后序列,平均GC含量为65.45%。该研究在南非马菲金的莫莱瓦内农场进行,鉴定出13个宏基因组组装基因组(MAG)。这些MAG的功能注释表明它们参与了植物生长发育的基本功能,如硫和氮代谢。该数据集已存入NCBI数据库,MAG的登录号可在DDBJ/ENA/GenBank下获取,登录号为PRJNA101755。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c01d/11460481/5bf2a745e189/gr1.jpg

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