文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

宫颈癌中表观遗传谱分析的进展:用于分类DNA甲基化模式的机器学习技术

Advancing epigenetic profiling in cervical cancer: machine learning techniques for classifying DNA methylation patterns.

作者信息

Handa Vikas, Batra Shalini, Arora Vinay

机构信息

Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, India.

Computer Science & Engineering Department, Thapar Institute of Engineering & Technology, Patiala, India.

出版信息

3 Biotech. 2024 Nov;14(11):264. doi: 10.1007/s13205-024-04107-2. Epub 2024 Oct 9.


DOI:10.1007/s13205-024-04107-2
PMID:39391214
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11461404/
Abstract

This study investigates the ability to predict DNA methylation patterns in cervical cancer cells using decision-tree-based ensemble approaches and neural network-based models. The research findings suggest that a model based on random forest achieves a significant prediction accuracy of 91.35%. This projection was derived from comprehensive experimentation and a meticulous performance evaluation of the random forest model, employing a range of measures including Accuracy, Sensitivity, Specificity, Matthews Correlation Coefficient, F1-score, Recall, and Precision. The results indicate that the random forest model exhibits superior performance compared to other tree-based models such as the Simple Decision Tree and XGBoost, as well as neural network-based models including Convolutional Neural Networks, Feed Forward Networks, and Wavelet Neural Networks. The findings indicate that using random forest-based techniques has great potential for future study and might be highly valuable in clinical applications, especially in improving diagnostic and treatment strategies based on epigenetic profiles.

摘要

本研究调查了使用基于决策树的集成方法和基于神经网络的模型预测宫颈癌细胞中DNA甲基化模式的能力。研究结果表明,基于随机森林的模型实现了91.35%的显著预测准确率。这一预测是通过对随机森林模型进行全面实验和细致的性能评估得出的,采用了包括准确率、灵敏度、特异性、马修斯相关系数、F1分数、召回率和精确率等一系列指标。结果表明,与其他基于树的模型(如简单决策树和XGBoost)以及基于神经网络的模型(包括卷积神经网络、前馈网络和小波神经网络)相比,随机森林模型表现出更优的性能。研究结果表明,基于随机森林的技术在未来研究中具有巨大潜力,在临床应用中可能具有很高的价值,特别是在基于表观遗传特征改进诊断和治疗策略方面。

相似文献

[1]
Advancing epigenetic profiling in cervical cancer: machine learning techniques for classifying DNA methylation patterns.

3 Biotech. 2024-11

[2]
Supervised Machine Learning Models for Predicting Sepsis-Associated Liver Injury in Patients With Sepsis: Development and Validation Study Based on a Multicenter Cohort Study.

J Med Internet Res. 2025-5-26

[3]
Comparison of Two Modern Survival Prediction Tools, SORG-MLA and METSSS, in Patients With Symptomatic Long-bone Metastases Who Underwent Local Treatment With Surgery Followed by Radiotherapy and With Radiotherapy Alone.

Clin Orthop Relat Res. 2024-12-1

[4]
UNet with Attention Networks: A Novel Deep Learning Approach for DNA Methylation Prediction in HeLa Cells.

Genes (Basel). 2025-5-28

[5]
Machine Learning Did Not Outperform Conventional Competing Risk Modeling to Predict Revision Arthroplasty.

Clin Orthop Relat Res. 2024-8-1

[6]
Comparative analysis of convolutional neural networks and transformer architectures for breast cancer histopathological image classification.

Front Med (Lausanne). 2025-6-17

[7]
Improved bio-inspired with machine learning computing approach for thyroid prediction.

Sci Rep. 2025-7-2

[8]
Signs and symptoms to determine if a patient presenting in primary care or hospital outpatient settings has COVID-19.

Cochrane Database Syst Rev. 2022-5-20

[9]
Comparative analysis of convolutional neural networks and traditional machine learning models for IVF live birth prediction: a retrospective analysis of 48514 IVF cycles and an evaluation of deployment feasibility in resource-constrained settings.

Front Endocrinol (Lausanne). 2025-6-12

[10]
Construction and validation of HBV-ACLF bacterial infection diagnosis model based on machine learning.

BMC Infect Dis. 2025-7-1

本文引用的文献

[1]
Early detection and diagnosis of cancer with interpretable machine learning to uncover cancer-specific DNA methylation patterns.

Biol Methods Protoc. 2024-6-20

[2]
Application of deep learning in cancer epigenetics through DNA methylation analysis.

Brief Bioinform. 2023-9-22

[3]
Artificial intelligence and cancer.

Nat Cancer. 2020-2

[4]
Cancer: A deep learning-based pan-cancer metastasis prediction model developed using multi-omics data.

Comput Struct Biotechnol J. 2021-8-9

[5]
Predictive Supervised Machine Learning Models for Diabetes Mellitus.

SN Comput Sci. 2020

[6]
A Linear Regression and Deep Learning Approach for Detecting Reliable Genetic Alterations in Cancer Using DNA Methylation and Gene Expression Data.

Genes (Basel). 2020-8-12

[7]
A hierarchical integration deep flexible neural forest framework for cancer subtype classification by integrating multi-omics data.

BMC Bioinformatics. 2019-10-28

[8]
Risk stratification of cervical lesions using capture sequencing and machine learning method based on HPV and human integrated genomic profiles.

Carcinogenesis. 2019-10-16

[9]
LightCpG: a multi-view CpG sites detection on single-cell whole genome sequence data.

BMC Genomics. 2019-4-23

[10]
MRCNN: a deep learning model for regression of genome-wide DNA methylation.

BMC Genomics. 2019-4-4

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索