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人源鸟苷结合蛋白1(GBP1)组装抗菌膜包被的结构基础

Structural basis of antimicrobial membrane coat assembly by human GBP1.

作者信息

Kuhm Tanja, Taisne Clémence, de Agrela Pinto Cecilia, Gross Luca, Giannopoulou Evdokia A, Huber Stefan T, Pardon Els, Steyaert Jan, Tans Sander J, Jakobi Arjen J

机构信息

Department of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.

AMOLF, Amsterdam, The Netherlands.

出版信息

Nat Struct Mol Biol. 2025 Jan;32(1):172-184. doi: 10.1038/s41594-024-01400-9. Epub 2024 Oct 11.

Abstract

Guanylate-binding proteins (GBPs) are interferon-inducible guanosine triphosphate hydrolases (GTPases) mediating host defense against intracellular pathogens. Their antimicrobial activity hinges on their ability to self-associate and coat pathogen-associated compartments or cytosolic bacteria. Coat formation depends on GTPase activity but how nucleotide binding and hydrolysis prime coat formation remains unclear. Here, we report the cryo-electron microscopy structure of the full-length human GBP1 dimer in its guanine nucleotide-bound state and describe the molecular ultrastructure of the GBP1 coat on liposomes and bacterial lipopolysaccharide membranes. Conformational changes of the middle and GTPase effector domains expose the isoprenylated C terminus for membrane association. The α-helical middle domains form a parallel, crossover arrangement essential for coat formation and position the extended effector domain for intercalation into the lipopolysaccharide layer of gram-negative membranes. Nucleotide binding and hydrolysis create oligomeric scaffolds with contractile abilities that promote membrane extrusion and fragmentation. Our data offer a structural and mechanistic framework for understanding GBP1 effector functions in intracellular immunity.

摘要

鸟苷酸结合蛋白(GBPs)是干扰素诱导的鸟苷三磷酸水解酶(GTPases),介导宿主对细胞内病原体的防御。它们的抗菌活性取决于其自我缔合以及覆盖病原体相关区室或胞质细菌的能力。外壳形成依赖于GTPase活性,但核苷酸结合和水解如何启动外壳形成仍不清楚。在这里,我们报道了全长人GBP1二聚体在其鸟嘌呤核苷酸结合状态下的冷冻电子显微镜结构,并描述了GBP1在脂质体和细菌脂多糖膜上的外壳分子超微结构。中间结构域和GTPase效应结构域的构象变化使异戊二烯化的C末端暴露以进行膜结合。α螺旋中间结构域形成平行的交叉排列,这对外壳形成至关重要,并将延伸的效应结构域定位为插入革兰氏阴性膜的脂多糖层。核苷酸结合和水解产生具有收缩能力的寡聚支架,促进膜挤出和破碎。我们的数据为理解GBP1在细胞内免疫中的效应功能提供了结构和机制框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/771e/11746146/325bddbd30b8/41594_2024_1400_Fig1_HTML.jpg

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