The Francis Crick Institute.
The Francis Crick Institute;
J Vis Exp. 2024 Sep 27(211). doi: 10.3791/67212.
Faithful genome duplication is essential for preserving the genetic stability of dividing cells. DNA replication is carried out during the S phase by a dynamic complex of proteins termed the replisome. At the heart of the replisome is the CDC45-MCM2-7-GINS (CMG) helicase, which separates the two strands of the DNA double helix such that DNA polymerases can copy each strand. During genome duplication, replisomes must overcome a plethora of obstacles and challenges. Each of these threatens genome stability, as failure to replicate DNA completely and accurately can lead to mutations, diseases, or cell death. Therefore, it is of great interest to understand how CMG functions in the replisome during both normal replication and replication stress. Here, we describe a total internal reflection fluorescence (TIRF) microscopy assay using recombinant purified proteins, which allows for real-time visualization of surface-tethered stretched DNA molecules by individual CMG complexes. This assay provides a powerful platform to investigate CMG behavior at the single-molecule level, allowing helicase dynamics to be directly observed with real-time control over reaction conditions.
忠实的基因组复制对于维持分裂细胞的遗传稳定性至关重要。DNA 复制是在 S 期由一个称为复制体的蛋白质动态复合物完成的。复制体的核心是 CDC45-MCM2-7-GINS(CMG)解旋酶,它将 DNA 双螺旋的两条链分开,以便 DNA 聚合酶可以复制每条链。在基因组复制过程中,复制体必须克服众多障碍和挑战。这些挑战中的每一个都威胁着基因组的稳定性,因为如果不能完全准确地复制 DNA,就会导致突变、疾病或细胞死亡。因此,了解 CMG 在正常复制和复制应激过程中在复制体中的功能非常重要。在这里,我们描述了一种使用重组纯化蛋白的全内反射荧光(TIRF)显微镜测定法,该方法允许通过单个 CMG 复合物实时可视化表面连接的拉伸 DNA 分子。该测定法提供了一个强大的平台,可在单分子水平上研究 CMG 的行为,允许直接观察解旋酶动力学,并实时控制反应条件。