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2-脱氧-4---肌苷(DEI)是 EboD 的产物,EboD 是细菌和黄藻门真眼点藻中高度保守的脱氢奎宁酸合酶样酶。

2-Deoxy-4---inosose (DEI) is the Product of EboD, a Highly Conserved Dehydroquinate Synthase-like Enzyme in Bacteria and Eustigmatophyte Algae.

机构信息

Department of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97331-3507 United States.

Department of Biological Sciences, The University of Alabama, Tuscaloosa, Alabama 35487 United States.

出版信息

ACS Chem Biol. 2024 Nov 15;19(11):2277-2283. doi: 10.1021/acschembio.4c00510. Epub 2024 Oct 15.

Abstract

A cryptic cluster of genes, known as the ebo cluster, has been found in a variety of genomic contexts among bacteria and algae. In NZI7, the ebo cluster (a.k.a. EDB cluster) is involved in the bacterial repellent mechanism against nematode grazing. In cyanobacteria, the cluster plays a role in the transport of the scytonemin monomer from the cytosol to the periplasm. Despite their broad distribution and interesting phenotypes, neither the pathway nor the functions of the enzymes are known. Here we show that EboD proteins from the ebo clusters in and catalyze the cyclization of mannose 6-phosphate to a novel cyclitol, 2-deoxy-4---inosose. The enzyme product is postulated to be a precursor of a signaling molecule or a transporter in the organisms. This study sheds the first light onto ebo/EDB pathways and established a functionally distinct enzyme that extends the diversity of sugar phosphate cyclases.

摘要

一个名为 ebo 簇的神秘基因簇在细菌和藻类的各种基因组环境中被发现。在 NZI7 中,ebo 簇(也称为 EDB 簇)参与了细菌对线虫摄食的防御机制。在蓝细菌中,该簇在将 scytonemin 单体从细胞质运输到周质间隙中发挥作用。尽管它们分布广泛且具有有趣的表型,但酶的途径和功能尚不清楚。在这里,我们表明来自 和 的 ebo 簇中的 EboD 蛋白催化甘露糖 6-磷酸环化生成一种新型环糖醇,2-脱氧-4---肌醇。该酶产物被推测是生物体中信号分子或转运体的前体。本研究首次揭示了 ebo/EDB 途径,并建立了一种功能独特的酶,扩展了糖磷酸环化酶的多样性。

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