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sp. nov. 和 sp. nov.,从农田土壤中分离得到的新型产类胡萝卜素细菌物种。

sp. nov. and sp. nov., novel carotenoid-producing bacterial species isolated from farm soil.

机构信息

Department of Life Science, Dongguk University-Seoul, Goyang10326, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2024 Oct;74(10). doi: 10.1099/ijsem.0.006551.

Abstract

Two yellow-pigmented novel strains, designated HF-S3 and HF-S4, were isolated from farm soil in Paju, Republic of Korea. Cells of the two strains are characteristically Gram-stain-negative, facultatively anaerobic, catalase- and oxidase-positive, non-motile and rod-shaped. Strain HF-S3 grew at 10-37 °C, while HF-S4 grew at 15-35 °C. Both strains grew at pH 5.0-12.0 and in NaCl concentrations (w/v) of 0-2.0%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that HF-S3 and HF-S4 belong to the genus , with HF-S3 exhibiting 97.7, 97.6 and 97.4% similarity to DM2-R-LB4, DSM 4733 and FWC47, respectively. Strain HF-S4 displayed 97.9, 97.7 and 97.6% similarity to Cra20, ZFGT-11 and KIS18-15, respectively. The DNA G+C contents of HF-S3 and HF-S4 were 67.0 and 66.5 mol%, respectively. The digital DNA-DNA hybridization and average nucleotide identity values among the novel and related type strains were 20.2-28.2% and 75.9-84.3%, respectively. They all contained C 2-OH and C, summed feature 8 (C 6 and/or C 7) as the major fatty acids and ubiquinone-10 as the predominant respiratory quinone. Strains HF-S3 and HF-S4 were found to produce carotenoid-type pigments. Based on polyphasic taxonomic analysis, the new isolates ostensibly represent two novel species of the genus , with the proposed names sp. nov. and sp. nov. for strains HF-S3 and HF-S4, respectively. The and type strains are HF-S3 (=KACC 23554 =TBRC 18352) and HF-S4 (=KACC 23386 =TBRC 17899), respectively.

摘要

两株黄色素的新型菌株,分别命名为 HF-S3 和 HF-S4,从韩国抱川的农田土壤中分离得到。这两株菌的细胞特征为革兰氏阴性、兼性厌氧、接触酶和氧化酶阳性、不运动和杆状。菌株 HF-S3 在 10-37°C 生长,而 HF-S4 在 15-35°C 生长。两株菌均在 pH 值为 5.0-12.0 和 NaCl 浓度(w/v)为 0-2.0%的条件下生长。基于 16S rRNA 基因序列的系统发育分析表明,HF-S3 和 HF-S4 属于 属,HF-S3 与 DM2-R-LB4、DSM 4733 和 FWC47 的相似性分别为 97.7%、97.6%和 97.4%。菌株 HF-S4 与 Cra20、ZFGT-11 和 KIS18-15 的相似性分别为 97.9%、97.7%和 97.6%。HF-S3 和 HF-S4 的 DNA G+C 含量分别为 67.0 和 66.5mol%。新型菌株与相关模式菌株的数字 DNA-DNA 杂交值和平均核苷酸同一性值分别为 20.2-28.2%和 75.9-84.3%。它们均含有 C 2-OH 和 C 18:1ω7c, summed feature 8(C 6 和/或 C 7)作为主要脂肪酸,泛醌-10 作为主要呼吸醌。菌株 HF-S3 和 HF-S4 被发现产生类胡萝卜素色素。基于多相分类学分析,新分离株显然代表了 属的两个新种,菌株 HF-S3 和 HF-S4 分别命名为 sp. nov.和 sp. nov.。 和 型菌株分别为 HF-S3(=KACC 23554=TBRC 18352)和 HF-S4(=KACC 23386=TBRC 17899)。

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