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干扰长度揭示了物种间交叉放置的规律性。

Interference length reveals regularity of crossover placement across species.

机构信息

Max Planck Institute for Dynamics and Self-Organization, Am Faßberg 17, 37077, Göttingen, Germany.

University of Göttingen, Institute for the Dynamics of Complex Systems, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany.

出版信息

Nat Commun. 2024 Oct 17;15(1):8973. doi: 10.1038/s41467-024-53054-2.

Abstract

Crossover interference is a phenomenon that affects the number and positioning of crossovers in meiosis and thus affects genetic diversity and chromosome segregation. Yet, the underlying mechanism is not fully understood, partly because quantification is difficult. To overcome this challenge, we introduce the interference length L that quantifies changes in crossover patterning due to interference. We show that it faithfully captures known aspects of crossover interference and provides superior statistical power over previous measures such as the interference distance and the gamma shape parameter. We apply our analysis to empirical data and unveil a similar behavior of L across species, which hints at a common mechanism. A recently proposed coarsening model generally captures these aspects, providing a unified view of crossover interference. Consequently, L facilitates model refinements and general comparisons between alternative models of crossover interference.

摘要

交叉干扰是一种影响减数分裂中交叉点数量和位置的现象,从而影响遗传多样性和染色体分离。然而,其潜在机制尚不完全清楚,部分原因是定量分析较为困难。为了克服这一挑战,我们引入了干扰长度 L,用于量化交叉模式因干扰而发生的变化。我们表明,它忠实地捕捉到了交叉干扰的已知方面,并提供了比以前的措施(如干扰距离和伽马形状参数)更高的统计能力。我们将我们的分析应用于经验数据,并揭示了 L 在不同物种之间的相似行为,这暗示了一种共同的机制。最近提出的粗化模型通常可以捕捉到这些方面,为交叉干扰的模型提供了统一的观点。因此,L 有助于模型的改进和不同交叉干扰模型之间的一般比较。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a88d/11487058/dad30fdcb01c/41467_2024_53054_Fig1_HTML.jpg

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