Jiang Xingyou, Yang Wenting, Peng Caixia, Wu Kunlin, Fang Lin, Zeng Jingjue, Zeng Songjun, Li Lin
Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.
Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.
Mitochondrial DNA B Resour. 2024 Oct 16;9(10):1409-1413. doi: 10.1080/23802359.2024.2415134. eCollection 2024.
is a Chinese traditional medicinal herb in the Orchidaceae family. It is a rare and special species that exhibits relatively large flowers. To illuminate its phylogenetic status and augment genomic resources, the complete chloroplast (cp) genome of was first sequenced and assembled using whole genome next-generation sequencing in this study. The cp genome size is 158,462 bp with a total GC content of 36.9%. Characterized by a quadripartite structure, the genome consists of a large single-copy (LSC) region of 86,032 bp, a small single-copy (SSC) region of 18,322 bp, which is separated by a pair of 27,054 bp inverted repeat regions (IRs). A total of 133 genes were annotated, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis strongly supported as the sister to two closely related terrestrial species, and . The results of this study provide genomic information for future research and application of this medicinal herb.
是兰科的一种中国传统草药。它是一种珍稀且特殊的物种,花朵相对较大。为阐明其系统发育地位并增加基因组资源,本研究首次使用全基因组二代测序对其完整叶绿体(cp)基因组进行测序和组装。cp基因组大小为158,462 bp,总GC含量为36.9%。该基因组具有四分体结构,由一个86,032 bp的大单拷贝(LSC)区域、一个18,322 bp的小单拷贝(SSC)区域组成,这两个区域被一对27,054 bp的反向重复区域(IRs)隔开。总共注释了133个基因,包括87个蛋白质编码基因、38个tRNA基因和8个rRNA基因。系统发育分析有力地支持其作为两个近缘地生物种和的姐妹种。本研究结果为该草药未来的研究和应用提供了基因组信息。