Department of Chemistry and QB3 Institute, Kavli Energy Nanoscience Institute, University of California, Berkeley, CA, USA.
Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Q Rev Biophys. 2024 Oct 22;57:e11. doi: 10.1017/S003358352400009X.
The parallel and synergistic developments of atomic resolution structural information, new spectroscopic methods, their underpinning formalism, and the application of sophisticated theoretical methods have led to a step function change in our understanding of photosynthetic light harvesting, the process by which photosynthetic organisms collect solar energy and supply it to their reaction centers to initiate the chemistry of photosynthesis. The new spectroscopic methods, in particular multidimensional spectroscopies, have enabled a transition from recording rates of processes to focusing on mechanism. We discuss two ultrafast spectroscopies - two-dimensional electronic spectroscopy and two-dimensional electronic-vibrational spectroscopy - and illustrate their development through the lens of photosynthetic light harvesting. Both spectroscopies provide enhanced spectral resolution and, in different ways, reveal pathways of energy flow and coherent oscillations which relate to the quantum mechanical mixing of, for example, electronic excitations (excitons) and nuclear motions. The new types of information present in these spectra provoked the application of sophisticated quantum dynamical theories to describe the temporal evolution of the spectra and provide new questions for experimental investigation. While multidimensional spectroscopies have applications in many other areas of science, we feel that the investigation of photosynthetic light harvesting has had the largest influence on the development of spectroscopic and theoretical methods for the study of quantum dynamics in biology, hence the focus of this review. We conclude with key questions for the next decade of this review.
原子分辨率结构信息、新的光谱方法、它们的基础形式以及复杂理论方法的应用的平行和协同发展,导致我们对光合作用光捕获的理解发生了阶跃式变化,光合作用光捕获是光合作用生物收集太阳能并将其供应给反应中心以启动光合作用化学的过程。新的光谱方法,特别是多维光谱学,已经使我们能够从记录过程的速率转变为关注机制。我们讨论了两种超快光谱学——二维电子光谱学和二维电子振动光谱学,并通过光合作用光捕获的视角来说明它们的发展。这两种光谱学都提供了增强的光谱分辨率,并以不同的方式揭示了能量流动和相干振荡的途径,这些途径与例如电子激发(激子)和核运动的量子力学混合有关。这些光谱中存在的新型信息引发了复杂量子动力学理论的应用,以描述光谱的时间演化,并为实验研究提供了新的问题。虽然多维光谱学在科学的许多其他领域都有应用,但我们认为光合作用光捕获的研究对生物量子动力学研究的光谱学和理论方法的发展产生了最大的影响,因此这是本综述的重点。我们以这篇综述的下一个十年的关键问题作为结尾。