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无定形热嗜酯酶的结构与稳定性,该酶能够水解聚羟基丁酸酯。

Structure and stability of an apo thermophilic esterase that hydrolyzes polyhydroxybutyrate.

机构信息

School of Chemistry and Biochemistry, Georgia Institute of Technology, 901 Atlantic Drive NW, Atlanta, GA 30332, USA.

Kimberly-Clark Corporation, 1400 Holcomb Bridge Road, Roswell, GA 30076, USA.

出版信息

Acta Crystallogr D Struct Biol. 2024 Nov 1;80(Pt 11):791-799. doi: 10.1107/S2059798324009707. Epub 2024 Oct 23.

Abstract

Pollution from plastics is a global problem that threatens the biosphere for a host of reasons, including the time scale that it takes for most plastics to degrade. Biodegradation is an ideal solution for remediating bioplastic waste as it does not require the high temperatures necessary for thermal degradation and does not introduce additional pollutants into the environment. Numerous organisms can scavenge for bioplastics, such as polylactic acid (PLA) or poly-(R)-hydroxybutyrate (PHB), which they can use as an energy source. Recently, a promiscuous PHBase from the thermophilic soil bacterium Lihuaxuella thermophila (LtPHBase) was identified. LtPHBase can accommodate many substrates, including PHB granules and films and PHB block copolymers, as well as the unrelated polymers polylactic acid (PLA) and polycaprolactone (PCL). LtPHBase uses the expected Ser-His-Asp catalytic triad for hydrolysis at an optimal enzyme activity near 70°C. Here, the 1.75 Å resolution crystal structure of apo LtPHBase is presented and its chemical stability is profiled. Knowledge of its substrate preferences was extended to different-sized PHB granules. It is shown that LtPHBase is highly resistant to unfolding, with barriers typical for thermophilic enzymes, and shows a preference for low-molecular-mass PHB granules. These insights have implications for the long-term potential of LtPHBase as an industrial PHB hydrolase and shed light on the evolutionary role that this enzyme plays in bacterial metabolism.

摘要

塑料污染是一个全球性问题,由于多种原因威胁着生物圈,包括大多数塑料降解所需的时间尺度。生物降解是一种修复生物塑料废物的理想方法,因为它不需要热降解所需的高温,并且不会向环境中引入额外的污染物。许多生物可以掠夺生物塑料,例如聚乳酸(PLA)或聚(R)-羟基丁酸酯(PHB),它们可以将其用作能源。最近,从嗜热土壤细菌 Lihuaxuella thermophila(LtPHBase)中鉴定出一种混杂的 PHBase。LtPHBase 可以容纳许多底物,包括 PHB 颗粒和薄膜以及 PHB 嵌段共聚物,以及不相关的聚合物聚乳酸(PLA)和聚己内酯(PCL)。LtPHBase 在接近 70°C 的最佳酶活性下使用预期的 Ser-His-Asp 催化三联体进行水解。在此,呈现了 apo LtPHBase 的 1.75 Å 分辨率晶体结构,并对其化学稳定性进行了分析。其底物偏好的知识已扩展到不同大小的 PHB 颗粒。结果表明,LtPHBase 对展开具有高度抗性,具有嗜热酶的典型障碍,并表现出对低分子量 PHB 颗粒的偏好。这些见解对 LtPHBase 作为工业 PHB 水解酶的长期潜力具有重要意义,并阐明了该酶在细菌代谢中所起的进化作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cfa6/11544428/c7249c7c8d70/d-80-00791-fig1.jpg

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