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用于纳米晶体中晶粒自动计数和原子分辨率图像分割的无监督学习

Unsupervised Learning for the Automatic Counting of Grains in Nanocrystals and Image Segmentation at the Atomic Resolution.

作者信息

Sohn Woonbae, Kim Taekyung, Moon Cheon Woo, Shin Dongbin, Park Yeji, Jin Haneul, Baik Hionsuck

机构信息

Seoul Center, Korean Basic Science Institute, Korea Road 22 6-7, Seoul 02841, Republic of Korea.

Department of Display Materials Engineering, Soonchunhyang University, 22 Soonchunhyang-ro, Sinchang-myeon, Asan 31538, Republic of Korea.

出版信息

Nanomaterials (Basel). 2024 Oct 10;14(20):1614. doi: 10.3390/nano14201614.

DOI:10.3390/nano14201614
PMID:39452951
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11510824/
Abstract

Identifying the grain distribution and grain boundaries of nanoparticles is important for predicting their properties. Experimental methods for identifying the crystallographic distribution, such as precession electron diffraction, are limited by their probe size. In this study, we developed an unsupervised learning method by applying a Gabor filter to HAADF-STEM images at the atomic level for image segmentation and automatic counting of grains in polycrystalline nanoparticles. The methodology comprises a Gabor filter for feature extraction, non-negative matrix factorization for dimension reduction, and K-means clustering. We set the threshold distance and angle between the clusters required for the number of clusters to converge so as to automatically determine the optimal number of grains. This approach can shed new light on the nature of polycrystalline nanoparticles and their structure-property relationships.

摘要

识别纳米颗粒的晶粒分布和晶界对于预测其性能至关重要。用于识别晶体学分布的实验方法,如进动电子衍射,受到其探针尺寸的限制。在本研究中,我们开发了一种无监督学习方法,通过在原子水平上对高角度环形暗场扫描透射电子显微镜(HAADF-STEM)图像应用Gabor滤波器,用于多晶纳米颗粒的图像分割和晶粒自动计数。该方法包括用于特征提取的Gabor滤波器、用于降维的非负矩阵分解和K均值聚类。我们设置了聚类收敛所需的簇之间的阈值距离和角度,以便自动确定最佳晶粒数量。这种方法可以为多晶纳米颗粒的性质及其结构-性能关系提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/0f1338fa5889/nanomaterials-14-01614-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/5fbb61f208f7/nanomaterials-14-01614-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/141f731aef7e/nanomaterials-14-01614-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/b15c323efae0/nanomaterials-14-01614-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/1e4a5563bd18/nanomaterials-14-01614-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/1bc7af710d0d/nanomaterials-14-01614-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/0f1338fa5889/nanomaterials-14-01614-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/5fbb61f208f7/nanomaterials-14-01614-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/141f731aef7e/nanomaterials-14-01614-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/b15c323efae0/nanomaterials-14-01614-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/1e4a5563bd18/nanomaterials-14-01614-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/1bc7af710d0d/nanomaterials-14-01614-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59c5/11510824/0f1338fa5889/nanomaterials-14-01614-g006.jpg

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本文引用的文献

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Micromachines (Basel). 2024 Aug 31;15(9):1119. doi: 10.3390/mi15091119.
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Three-dimensional reconstruction of Y-IrNi rhombic dodecahedron nanoframe by STEM/EDS tomography.通过扫描透射电子显微镜/能谱断层扫描对Y-IrNi菱形十二面体纳米框架进行三维重建。
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Phase diagrams guide synthesis of highly ordered intermetallic electrocatalysts: separating alloying and ordering stages.
相图指导高度有序金属间化合物电催化剂的合成:分离合金化和有序化阶段。
Nat Commun. 2022 Dec 10;13(1):7654. doi: 10.1038/s41467-022-35457-1.
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Understanding the Influence of Receptive Field and Network Complexity in Neural Network-Guided TEM Image Analysis.理解感受野和网络复杂性在神经网络引导的透射电子显微镜图像分析中的影响。
Microsc Microanal. 2022 Sep 13:1-9. doi: 10.1017/S1431927622012466.
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Direct Observation of Three-Dimensional Atomic Structure of Twinned Metallic Nanoparticles and Their Catalytic Properties.孪晶金属纳米颗粒的三维原子结构及其催化性能的直接观测
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