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基于全基因组关联分析和孟德尔随机化分析的椎间盘出血与原发性开角型青光眼之间的关联

Associations between Disc Hemorrhage and Primary Open-Angle Glaucoma Based on Genome-Wide Association and Mendelian Randomization Analyses.

作者信息

Seo Je Hyun, Lee Young, Choi Hyuk Jin

机构信息

Veterans Medical Research Institute, Veterans Health Service Medical Center, Seoul 05368, Republic of Korea.

Department of Ophthalmology, Seoul National University College of Medicine, Seoul 03080, Republic of Korea.

出版信息

Biomedicines. 2024 Oct 3;12(10):2253. doi: 10.3390/biomedicines12102253.

Abstract

We aimed to investigate the genetic loci related to disc hemorrhage (DH) and the relationship of causation between DH and primary open-angle glaucoma (POAG) using a genome-wide association study (GWAS) in East Asian individuals. The GWAS included 8488 Koreans who underwent ocular examination including fundus photography to determine the presence of DH and POAG. We performed a GWAS to identify significant single-nucleotide polymorphisms (SNPs) associated with DH and analyzed the heritability of DH and genetic correlation between DH and POAG. The identified SNPs were utilized as instrumental variables (IVs) for two-sample Mendelian randomization (MR) analysis. The POAG outcome dataset was adopted from Biobank Japan data (n = 179,351). We found that the rs62463744 (;), rs11658281 (), and rs77127203 (;) SNPs were associated with DH. The SNP heritability of DH was estimated to be 6.7%, with an absence of a genetic correlation with POAG. MR analysis did not reveal a causal association between DH and POAG for East Asian individuals. The novel loci underlying DH in the Korean cohort revealed SNPs in the , , and genes. The absence of a causal association between DH and POAG implies that DH is a shared risk factor, rather than an independent culprit factor, and warrants further investigation.

摘要

我们旨在通过对东亚人群进行全基因组关联研究(GWAS),调查与盘状出血(DH)相关的基因位点以及DH与原发性开角型青光眼(POAG)之间的因果关系。该GWAS纳入了8488名接受眼科检查(包括眼底照相)以确定是否存在DH和POAG的韩国人。我们进行了GWAS以识别与DH相关的显著单核苷酸多态性(SNP),并分析了DH的遗传力以及DH与POAG之间的遗传相关性。所识别的SNP被用作两样本孟德尔随机化(MR)分析的工具变量(IV)。POAG结局数据集采用日本生物银行的数据(n = 179,351)。我们发现rs62463744(;)、rs11658281()和rs77127203(;)SNP与DH相关。DH的SNP遗传力估计为6.7%,与POAG不存在遗传相关性。MR分析未揭示东亚人群中DH与POAG之间存在因果关联。韩国队列中DH潜在的新基因位点揭示了、和基因中的SNP。DH与POAG之间不存在因果关联意味着DH是一个共同的风险因素,而非独立的致病因素,值得进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba2/11504051/977b425f3eb9/biomedicines-12-02253-g001.jpg

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