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波纳替尼:其研发背后的药物化学史综述

Ponatinib: A Review of the History of Medicinal Chemistry behind Its Development.

作者信息

Nascimento Mayara, Moura Stefany, Parra Lidia, Vasconcellos Valeska, Costa Gabriela, Leite Debora, Dias Maria, Fernandes Tácio Vinício Amorim, Hoelz Lucas, Pimentel Luiz, Bastos Monica, Boechat Nubia

机构信息

Programa de Pós-Graduação em Farmacologia e Química Medicinal do Instituto de Ciências Biomédicas-ICB-UFRJ, Centro de Ciências da Saúde-CCS, Bloco J, Ilha do Fundão, Rio de Janeiro 21941-902, RJ, Brazil.

Departamento de Síntese de Fármacos, Instituto de Tecnologia em Fármacos, Farmanguinhos-Fiocruz, Manguinhos, Rio de Janeiro 21041-250, RJ, Brazil.

出版信息

Pharmaceuticals (Basel). 2024 Oct 11;17(10):1361. doi: 10.3390/ph17101361.

Abstract

The primary treatment for chronic myeloid leukemia (CML) involves first- and second-generation tyrosine kinase inhibitors (TKIs), such as imatinib, nilotinib, bosutinib, and dasatinib. However, these medications are ineffective against mutations in the kinase domain of the ABL1 protein, particularly in the protein with the T315I mutation. To address this, ponatinib (PNT), a third-generation inhibitor, was developed. Despite its efficacy in treating the BCR-ABL1 mutation, the use of PNT was briefly suspended in 2013 due to serious adverse effects but was subsequently reintroduced to the market. During the drug discovery and development process, it is rare to consolidate all information into a single article, as is the case with ponatinib. This review aims to compile and chronologically organize the research on the discovery of ponatinib using medicinal chemistry tools and computational methods. It includes in silico calculations, such as the octanol/water partition coefficient (cLogP) via SwissAdme, and 2D maps of intermolecular interactions through molecular docking. This approach enhances understanding for both specialists and those interested in medicinal chemistry and pharmacology, while also contextualizing future directions for further optimizations of ponatinib, facilitating the development of new analogs of this crucial inhibitor for the treatment of CML and Philadelphia chromosome-positive acute lymphoblastic leukemia (ALL).

摘要

慢性髓性白血病(CML)的主要治疗方法包括第一代和第二代酪氨酸激酶抑制剂(TKIs),如伊马替尼、尼洛替尼、博舒替尼和达沙替尼。然而,这些药物对ABL1蛋白激酶结构域中的突变无效,尤其是对具有T315I突变的蛋白。为了解决这个问题,开发了第三代抑制剂波纳替尼(PNT)。尽管PNT在治疗BCR-ABL1突变方面有效,但由于严重的不良反应,其使用在2013年曾短暂暂停,但随后又重新投放市场。在药物研发过程中,像波纳替尼这样将所有信息整合到一篇文章中的情况很少见。这篇综述旨在整理并按时间顺序组织利用药物化学工具和计算方法发现波纳替尼的相关研究。它包括计算机模拟计算,如通过SwissAdme计算辛醇/水分配系数(cLogP),以及通过分子对接得到的分子间相互作用的二维图谱。这种方法增强了专家以及对药物化学和药理学感兴趣的人的理解,同时也为波纳替尼进一步优化的未来方向提供了背景信息,有助于开发这种治疗CML和费城染色体阳性急性淋巴细胞白血病(ALL)的关键抑制剂的新类似物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e77f/11510555/79e9d332c61c/pharmaceuticals-17-01361-g001.jpg

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