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磷酸化对人α-突触核蛋白在水溶液中生理形态的影响。

Impact of Phosphorylation on the Physiological Form of Human alpha-Synuclein in Aqueous Solution.

机构信息

Jülich Supercomputing Centre (JSC), Forschungszentrum Jülich GmbH, 52425 Jülich, Germany.

Department of Physics, RWTH Aachen University, 52062 Aachen, Germany.

出版信息

J Chem Inf Model. 2024 Nov 11;64(21):8215-8226. doi: 10.1021/acs.jcim.4c01172. Epub 2024 Oct 27.

Abstract

Serine 129 can be phosphorylated in pathological inclusions formed by the intrinsically disordered protein human α-synuclein (AS), a key player in Parkinson's disease and other synucleinopathies. Here, molecular simulations provide insight into the structural ensemble of phosphorylated AS. The simulations allow us to suggest that phosphorylation significantly impacts the structural content of the physiological AS conformational ensemble in aqueous solution, as the phosphate group is mostly solvated. The hydrophobic region of AS contains β-hairpin structures, which may increase the propensity of the protein to undergo amyloid formation, as seen in the nonphysiological (nonacetylated) form of the protein in a recent molecular simulation study. Our findings are consistent with existing experimental data with the caveat of the observed limitations of the force field for the phosphorylated moiety.

摘要

丝氨酸 129 可在由无序蛋白人α-突触核蛋白(AS)形成的病理包涵体中发生磷酸化,AS 是帕金森病和其他突触核蛋白病的关键参与者。在此,分子模拟为磷酸化 AS 的结构整体提供了深入的了解。模拟使我们能够提出,磷酸基团主要被溶剂化,因此磷酸化会显著影响生理 AS 构象整体在水溶液中的结构含量。AS 的疏水区含有β-发夹结构,这可能会增加蛋白质发生淀粉样形成的倾向,就像在最近的分子模拟研究中观察到的非生理(未乙酰化)形式的蛋白质一样。我们的发现与现有的实验数据一致,但需要注意磷酸化部分的力场的观察到的局限性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7725/11558680/d901475f3a29/ci4c01172_0001.jpg

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