Department of Biomedical Sciences, Rio Grande do Norte State University, Mossoró, Brazil.
Department of Microbiology and Parasitology, Federal University of Rio Grande do Norte, Natal, Brazil.
Asian Pac J Cancer Prev. 2024 Oct 1;25(10):3533-3541. doi: 10.31557/APJCP.2024.25.10.3533.
Cervical cancer has a high incidence and mortality rate, affecting more than half a million women in 2018. Its development is strongly related to high-risk HPV infection. After infection, several cellular molecules are affected, including microRNAs (miRNAs), which are the focus of our study. We aimed to investigate changes in microRNA expression associated with cervical cancer and analyze the biological significance of these changes induced by HPV proteins.
We analyzed transcriptome data retrieved from the NCBI website to investigate miRNA and gene expression in cervical cancer. We evaluated the alteration in expression of miRNAs and genes (between normal tissues and cervical cancer) using the GEO2R tool and selected those with significantly altered expression (p-value < 0.05). The target genes of miRNAs were predicted using the miRNA Pathway Dictionary Database. Subsequently, we created a network of biological pathways affected by miRNA deregulation using Cytoscape software and associated the altered miRNAs with the Hallmarks of Cancer using COSMIC v84.
We identified 10 miRNAs and 82 target genes with significantly altered expression levels in cervical cancer that matched the predicted results. In addition, the deregulation of these genes causes changes in 52 biological pathways. These miRNAs affected pathways such as interferon signaling (miR-106b-5p and miR-1183), signaling by interleukins (miR-557, miR-106b-5p, miR-15a-5p, and miR-21-5p), oxidative stress-induced senescence (miR-557 and miR-15a-5p), cell cycle checkpoints (miR-557), transcriptional regulation by P53 (miR-557 and miR-15a-5p), and the exchange of oxygen and carbon dioxide in erythrocytes (miR-15a-5p).
Alterations in miRNA expression play an important role in the pathogenesis of cervical cancer, affecting several biological pathways and Hallmarks of Cancer, such as immune system regulation, cell cycle regulation, and energy metabolism. Thus, their analysis can contribute to the development of diagnostic and prognostic biomarkers and more effective treatments for cervical cancer.
宫颈癌发病率和死亡率较高,2018 年影响了超过 50 万女性。其发展与高危 HPV 感染密切相关。感染后,一些细胞分子受到影响,包括 microRNAs(miRNAs),这是我们研究的重点。我们旨在研究与宫颈癌相关的 microRNA 表达变化,并分析 HPV 蛋白诱导的这些变化的生物学意义。
我们分析了从 NCBI 网站检索到的转录组数据,以研究宫颈癌中的 miRNA 和基因表达。我们使用 GEO2R 工具评估了 miRNA 和基因(正常组织与宫颈癌之间)表达的变化,选择表达明显改变的 miRNA 和基因(p 值<0.05)。使用 miRNA 途径字典数据库预测 miRNA 的靶基因。随后,我们使用 Cytoscape 软件创建了受 miRNA 失调影响的生物途径网络,并使用 COSMIC v84 将改变的 miRNA 与癌症的标志性特征相关联。
我们鉴定出 10 个 miRNA 和 82 个靶基因在宫颈癌中表达水平明显改变,与预测结果相匹配。此外,这些基因的失调导致 52 个生物学途径的改变。这些 miRNA 影响了干扰素信号(miR-106b-5p 和 miR-1183)、白细胞介素信号(miR-557、miR-106b-5p、miR-15a-5p 和 miR-21-5p)、氧化应激诱导的衰老(miR-557 和 miR-15a-5p)、细胞周期检查点(miR-557)、P53 转录调控(miR-557 和 miR-15a-5p)和红细胞的氧气和二氧化碳交换(miR-15a-5p)等途径。
miRNA 表达的改变在宫颈癌的发病机制中起着重要作用,影响了包括免疫系统调节、细胞周期调节和能量代谢在内的多个生物途径和癌症标志性特征。因此,对其进行分析可以为宫颈癌的诊断和预后生物标志物以及更有效的治疗方法的发展做出贡献。