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绘制人类皮质神经元中创伤后应激障碍的表观基因组图谱。

Mapping the epigenomic landscape of post-traumatic stress disorder in human cortical neurons.

作者信息

Núñez-Ríos Diana L, Nagamatsu Sheila T, Martínez-Magaña Jose Jaime, Hurd Yasmin, Rompala Gregory, Krystal John H, Montalvo-Ortiz Janitza L

机构信息

Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.

National Center of Post-Traumatic Stress Disorder, VA CT Healthcare System, West Haven, CT, USA.

出版信息

medRxiv. 2024 Oct 16:2024.10.11.24315258. doi: 10.1101/2024.10.11.24315258.

Abstract

The study conducted a comprehensive genome-wide analysis of differential 5mC and 5hmC modifications at both CpG and non-CpG sites in postmortem orbitofrontal neurons from 25 PTSD cases and 13 healthy controls. It was observed that PTSD patients exhibit a greater number of differential 5hmC sites compared to 5mC sites. Specifically, individuals with PTSD tend to show hyper-5mC/5hmC at CpG sites, particularly within CpG islands and promoter regions, and hypo-5mC/5hmC at non-CpG sites, especially within intragenic regions. Functional enrichment analysis indicated distinct yet interconnected roles for 5mC and 5hmC in PTSD. The 5mC marks primarily regulate cell-cell adhesion processes, whereas 5hmC marks are involved in embryonic morphogenesis and cell fate commitment. By integrating published PTSD findings from central and peripheral tissues through multi-omics approaches, several biological mechanisms were prioritized, including developmental processes, HPA axis regulation, and immune responses. Based on the consistent enrichment in developmental processes, we hypothesize that if epigenetic changes occur during early developmental stages, they may increase the risk of developing PTSD following trauma exposure. Conversely, if these epigenetic changes occur in adulthood, they may influence neuronal apoptosis and survival mechanisms.

摘要

该研究对25例创伤后应激障碍(PTSD)病例和13名健康对照者死后眶额神经元中CpG和非CpG位点的5-甲基胞嘧啶(5mC)和5-羟甲基胞嘧啶(5hmC)修饰进行了全面的全基因组分析。研究发现,与5mC位点相比,PTSD患者表现出更多的差异5hmC位点。具体而言,PTSD患者倾向于在CpG位点,特别是在CpG岛和启动子区域表现出5mC/5hmC高甲基化,而在非CpG位点,特别是在内含子区域表现出5mC/5hmC低甲基化。功能富集分析表明,5mC和5hmC在PTSD中发挥着不同但相互关联的作用。5mC标记主要调节细胞间粘附过程,而5hmC标记参与胚胎形态发生和细胞命运决定。通过多组学方法整合来自中枢和外周组织的已发表的PTSD研究结果,确定了几种生物学机制,包括发育过程、下丘脑-垂体-肾上腺(HPA)轴调节和免疫反应。基于发育过程中的持续富集,我们推测,如果表观遗传变化发生在早期发育阶段,它们可能会增加创伤暴露后发生PTSD的风险。相反,如果这些表观遗传变化发生在成年期,它们可能会影响神经元凋亡和存活机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6446/11527063/5d91a65c50d6/nihpp-2024.10.11.24315258v1-f0002.jpg

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