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祖先X-Y染色体基因对调控性别偏向基因表达

Regulation of Sex-biased Gene Expression by the Ancestral X-Y Chromosomal Gene Pair .

作者信息

Malcore Rebecca M, Samanta Milan Kumar, Kalantry Sundeep, Iwase Shigeki

机构信息

Department of Human Genetics, University of Michigan Medical School, Ann Arbor, MI 48105, USA.

Lead contact.

出版信息

bioRxiv. 2024 Oct 27:2024.10.24.620066. doi: 10.1101/2024.10.24.620066.

DOI:10.1101/2024.10.24.620066
PMID:39484414
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11527134/
Abstract

Conventionally, Y-linked is thought to drive sex differences by triggering differential hormone production. Ancestral X-Y gene pairs, however, are hypothesized to drive hormone-independent sex differences. Here, we show that the X-Y gene pair regulates sex-biased gene expression in pluripotent mouse embryonic stem cells (ESCs). Wild-type (WT) XX female ESCs exhibit >2-fold higher expression of 409 genes relative to WT XY male ESCs. Conversely, WT XY male ESCs exhibit >2-fold higher expression of 126 genes compared to WT XX female ESCs. Loss of in female ESCs downregulates female-biased genes. In contrast, loss of either or in male ESCs upregulates female-biased genes and downregulates male-biased genes, effectively neutralizing sex-biased gene expression. KDM5C promotes the expression of and several other Y-linked genes in male ESCs. Moreover, ectopic expression in female ESCs is sufficient to drive male-biased gene expression. These results establish as critical regulators of sex-biased gene expression.

摘要

传统上,人们认为Y染色体通过触发不同的激素产生来驱动性别差异。然而,据推测,祖先的X-Y基因对会驱动与激素无关的性别差异。在这里,我们表明X-Y基因对调节多能小鼠胚胎干细胞(ESC)中的性别偏向基因表达。野生型(WT)XX雌性ESC相对于WT XY雄性ESC表现出409个基因的表达水平高出两倍以上。相反,与WT XX雌性ESC相比,WT XY雄性ESC表现出126个基因的表达水平高出两倍以上。雌性ESC中该基因缺失会下调雌性偏向基因。相比之下,雄性ESC中该基因或另一基因缺失会上调雌性偏向基因并下调雄性偏向基因,有效地消除了性别偏向基因表达。KDM5C促进雄性ESC中该基因和其他几个Y连锁基因的表达。此外,雌性ESC中的异位该基因表达足以驱动雄性偏向基因表达。这些结果确立了该基因对作为性别偏向基因表达的关键调节因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/673468c29cb1/nihpp-2024.10.24.620066v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/2d681788d354/nihpp-2024.10.24.620066v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/cc4741e6180d/nihpp-2024.10.24.620066v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/a1aaa520de60/nihpp-2024.10.24.620066v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/48ff4df34c0e/nihpp-2024.10.24.620066v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/673468c29cb1/nihpp-2024.10.24.620066v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/2d681788d354/nihpp-2024.10.24.620066v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/cc4741e6180d/nihpp-2024.10.24.620066v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/a1aaa520de60/nihpp-2024.10.24.620066v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/48ff4df34c0e/nihpp-2024.10.24.620066v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eaf/11527134/673468c29cb1/nihpp-2024.10.24.620066v1-f0005.jpg

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本文引用的文献

1
Systematic identification of Y-chromosome gene functions in mouse spermatogenesis.小鼠精子发生过程中Y染色体基因功能的系统鉴定
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The human Y and inactive X chromosomes similarly modulate autosomal gene expression.人类的 Y 染色体和失活的 X 染色体同样调节着常染色体基因的表达。
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The histone demethylase KDM5C controls female bone mass by promoting energy metabolism in osteoclasts.
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Cells. 2023 Feb 16;12(4):637. doi: 10.3390/cells12040637.
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Sex-biased and parental allele-specific gene regulation by KDM6A.KDM6A 对性别偏向和亲本等位基因特异性基因调控。
Biol Sex Differ. 2022 Jul 23;13(1):40. doi: 10.1186/s13293-022-00452-0.
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Sexually dimorphic RNA helicases DDX3X and DDX3Y differentially regulate RNA metabolism through phase separation.性二态 RNA 解旋酶 DDX3X 和 DDX3Y 通过相分离差异调节 RNA 代谢。
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Activation of Xist by an evolutionarily conserved function of KDM5C demethylase.KDM5C 去甲基酶的一种进化保守功能激活 Xist。
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Relative contributions of sex hormones, sex chromosomes, and gonads to sex differences in tissue gene regulation.性激素、性染色体和性腺对组织基因调控性别差异的相对贡献。
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