Wegner Scott A, Avalos José L
Department of Molecular Biology, Princeton University, Princeton, NJ, 08544, USA.
Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.
Biotechnol Notes. 2024 Oct 18;5:140-150. doi: 10.1016/j.biotno.2024.10.001. eCollection 2024.
Isoprenoids are highly valued targets for microbial chemical production, allowing the creation of fragrances, biofuels, and pharmaceuticals from renewable carbon feedstocks. To increase isoprenoid production, previous efforts have manipulated pyruvate dehydrogenase (PDH) bypass pathway flux to increase cytosolic acetyl-coA; however, this results in mevalonate secretion and does not necessarily translate into higher isoprenoid production. Identification and disruption of the transporter mediating mevalonate secretion would allow us to determine whether increasing PDH bypass activity in the absence of secretion improves conversion of mevalonate into downstream isoprenoids. Attempted identification of the mevalonate transporter was accomplished using a pooled CRISPR library targeting all nonessential transporters and two different screening methods. Using a high throughput screen, based on growth of a mevalonate auxotrophic strain, it was found that disruption largely abolished accumulation of extracellular mevalonate. However, disruption of was found to lower overall mevalonate pathway activity, rather than prevent secretion, indicating a previously unreported interaction between zinc availability and the mevalonate pathway. In a second screen, significant differences in and library representation were found between wild-type and mevalonate secreting strains. However, no single deletion (or selected pair of double deletions) abolishes mevalonate secretion, indicating that this process appears to be mediated through multiple redundant transporters.
类异戊二烯是微生物化学生产中备受重视的目标产物,可利用可再生碳源原料制造香料、生物燃料和药物。为了提高类异戊二烯的产量,之前的研究通过操纵丙酮酸脱氢酶(PDH)旁路途径通量来增加胞质乙酰辅酶A;然而,这会导致甲羟戊酸分泌,且不一定能转化为更高的类异戊二烯产量。鉴定和破坏介导甲羟戊酸分泌的转运蛋白,将使我们能够确定在不分泌的情况下增加PDH旁路活性是否能提高甲羟戊酸向下游类异戊二烯的转化。使用针对所有非必需转运蛋白的混合CRISPR文库和两种不同的筛选方法,尝试鉴定甲羟戊酸转运蛋白。通过基于甲羟戊酸营养缺陷型菌株生长的高通量筛选,发现破坏该转运蛋白在很大程度上消除了细胞外甲羟戊酸的积累。然而,发现破坏该转运蛋白会降低整体甲羟戊酸途径活性,而不是阻止分泌,这表明锌可用性与甲羟戊酸途径之间存在以前未报道的相互作用。在第二次筛选中,发现野生型和分泌甲羟戊酸的菌株之间在文库代表性方面存在显著差异。然而,没有单个缺失(或选定的双缺失对)能消除甲羟戊酸分泌,这表明该过程似乎是通过多个冗余转运蛋白介导的。