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.的叶绿体的完整基因组序列

The complete genome sequence of the chloroplast of .

作者信息

Mao Hongyu, Wang Ziyi, Shan Yuanyu, Cheng Xin, Yu Jie

机构信息

College of Horticulture and Landscape Architecture, Southwest University, Chongqing, China.

Key Laboratory of Horticulture Science for Southern Mountainous Regions, Ministry of Education, Chongqing, China.

出版信息

Mitochondrial DNA B Resour. 2024 Nov 4;9(11):1487-1491. doi: 10.1080/23802359.2024.2420846. eCollection 2024.

Abstract

(Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 taxa were divided into five major clades, and was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.

摘要

菊科植物,原产于热带美洲,现广泛分布于亚洲和美洲。我们对其叶绿体基因组进行了探索并开展了系统发育分析。叶绿体基因组呈环状,由一个83,909个碱基对(bp)的大单拷贝(LSC)、一个18,407 bp的小单拷贝(SSC)以及两个各为24,729 bp的反向重复区域(IR)组成。系统发育分析表明,这19个分类单元被分为五个主要分支,且与两个物种关系最为密切。我们的研究结果提供了高质量的金黄菊叶绿体基因组,有助于DNA条形码开发和进化历史重建。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61f4/11536667/030098826c06/TMDN_A_2420846_F0001_C.jpg

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