• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单细胞多组学分析揭示氧诱导视网膜病变模型中 Müller 细胞的异质性。

Single-Cell Multiomics Profiling Reveals Heterogeneity of Müller Cells in the Oxygen-Induced Retinopathy Model.

机构信息

Department of Ophthalmology, Tianjin Medical University General Hospital, Tianjin, China.

School of Medicine, Nankai University, Tianjin, China.

出版信息

Invest Ophthalmol Vis Sci. 2024 Nov 4;65(13):8. doi: 10.1167/iovs.65.13.8.

DOI:10.1167/iovs.65.13.8
PMID:39504047
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11547256/
Abstract

PURPOSE

Retinal neovascularization poses heightened risks of vision loss and blindness. Despite its clinical significance, the molecular mechanisms underlying the pathogenesis of retinal neovascularization remain elusive. This study utilized single-cell multiomics profiling in an oxygen-induced retinopathy (OIR) model to comprehensively investigate the intricate molecular landscape of retinal neovascularization.

METHODS

Mice were exposed to hyperoxia to induce the OIR model, and retinas were isolated for nucleus isolation. The cellular landscape of the single-nucleus suspensions was extensively characterized through single-cell multiomics sequencing. Single-cell data were integrated with genome-wide association study (GWAS) data to identify correlations between ocular cell types and diabetic retinopathy. Cell communication analysis among cells was conducted to unravel crucial ligand-receptor signals. Trajectory analysis and dynamic characterization of Müller cells were performed, followed by integration with human retinal data for pathway analysis.

RESULTS

The multiomics dataset revealed six major ocular cell classes, with Müller cells/astrocytes showing significant associations with proliferative diabetic retinopathy (PDR). Cell communication analysis highlighted pathways that are associated with vascular proliferation and neurodevelopment, such as Vegfa-Vegfr2, Igf1-Igf1r, Nrxn3-Nlgn1, and Efna5-Epha4. Trajectory analysis identified a subset of Müller cells expressing genes linked to photoreceptor degeneration. Multiomics data integration further unveiled positively regulated genes in OIR Müller cells/astrocytes associated with axon development and neurotransmitter transmission.

CONCLUSIONS

This study significantly advances our understanding of the intricate cellular and molecular mechanisms underlying retinal neovascularization, emphasizing the pivotal role of Müller cells. The identified pathways provide valuable insights into potential therapeutic targets for PDR, offering promising directions for further research and clinical interventions.

摘要

目的

视网膜新生血管会增加视力丧失和失明的风险。尽管其具有临床意义,但视网膜新生血管发病机制的分子机制仍难以捉摸。本研究利用单细胞多组学分析在氧诱导的视网膜病变(OIR)模型中,全面研究视网膜新生血管的复杂分子景观。

方法

将小鼠暴露于高氧环境中以诱导 OIR 模型,并分离视网膜进行核分离。通过单细胞多组学测序广泛表征单细胞悬浮液的细胞景观。将单细胞数据与全基因组关联研究(GWAS)数据集成,以确定眼部细胞类型与糖尿病视网膜病变之间的相关性。对细胞间的细胞通讯进行分析,以揭示关键的配体-受体信号。对 Müller 细胞进行轨迹分析和动态特征分析,并与人类视网膜数据进行整合以进行途径分析。

结果

多组学数据集揭示了六种主要的眼部细胞类型,其中 Müller 细胞/星形胶质细胞与增殖性糖尿病视网膜病变(PDR)具有显著相关性。细胞通讯分析突出了与血管增殖和神经发育相关的途径,如 Vegfa-Vegfr2、Igf1-Igf1r、Nrxn3-Nlgn1 和 Efna5-Epha4。轨迹分析确定了一组表达与光感受器退行性变相关基因的 Müller 细胞。多组学数据集成进一步揭示了 OIR Müller 细胞/星形胶质细胞中与轴突发育和神经递质传递相关的正向调节基因。

结论

本研究显著提高了我们对视网膜新生血管发病机制中复杂细胞和分子机制的理解,强调了 Müller 细胞的关键作用。确定的途径为 PDR 的潜在治疗靶点提供了有价值的见解,为进一步的研究和临床干预提供了有希望的方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/43194886c56f/iovs-65-13-8-f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/a7e1d8b3d477/iovs-65-13-8-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/938181d9a072/iovs-65-13-8-f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/97e1df4ac94c/iovs-65-13-8-f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/43194886c56f/iovs-65-13-8-f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/a7e1d8b3d477/iovs-65-13-8-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/938181d9a072/iovs-65-13-8-f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/97e1df4ac94c/iovs-65-13-8-f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a95/11547256/43194886c56f/iovs-65-13-8-f004.jpg

相似文献

1
Single-Cell Multiomics Profiling Reveals Heterogeneity of Müller Cells in the Oxygen-Induced Retinopathy Model.单细胞多组学分析揭示氧诱导视网膜病变模型中 Müller 细胞的异质性。
Invest Ophthalmol Vis Sci. 2024 Nov 4;65(13):8. doi: 10.1167/iovs.65.13.8.
2
Pulmonary surfactant protein a is expressed in mouse retina by Müller cells and impacts neovascularization in oxygen-induced retinopathy.肺表面活性蛋白A在小鼠视网膜中由穆勒细胞表达,并影响氧诱导性视网膜病变中的新生血管形成。
Invest Ophthalmol Vis Sci. 2014 Nov 18;56(1):232-42. doi: 10.1167/iovs.13-13652.
3
A potent Nrf2 activator, dh404, bolsters antioxidant capacity in glial cells and attenuates ischaemic retinopathy.一种强效的Nrf2激活剂dh404可增强神经胶质细胞的抗氧化能力,并减轻缺血性视网膜病变。
Clin Sci (Lond). 2016 Aug 1;130(15):1375-87. doi: 10.1042/CS20160068. Epub 2016 Mar 22.
4
Mitigation of oxygen-induced retinopathy in α2β1 integrin-deficient mice.减轻α2β1 整合素缺陷型小鼠的氧诱导性视网膜病变。
Invest Ophthalmol Vis Sci. 2014 Jun 10;55(7):4338-47. doi: 10.1167/iovs.14-14061.
5
Short hairpin RNA-mediated knockdown of VEGFA in Müller cells reduces intravitreal neovascularization in a rat model of retinopathy of prematurity.短发夹 RNA 介导的 Müller 细胞中 VEGFA 的敲低可减少早产儿视网膜病变大鼠模型中的眼内新生血管形成。
Am J Pathol. 2013 Sep;183(3):964-74. doi: 10.1016/j.ajpath.2013.05.011.
6
PPARα-Dependent Effects of Palmitoylethanolamide Against Retinal Neovascularization and Fibrosis.棕榈酰乙醇酰胺通过 PPARα 对视网膜新生血管和纤维化的作用
Invest Ophthalmol Vis Sci. 2020 Apr 9;61(4):15. doi: 10.1167/iovs.61.4.15.
7
MiR-203a-3p inhibits retinal angiogenesis and alleviates proliferative diabetic retinopathy in oxygen-induced retinopathy (OIR) rat model via targeting VEGFA and HIF-1α.miR-203a-3p 通过靶向 VEGFA 和 HIF-1α 抑制视网膜血管生成并减轻氧诱导的视网膜病变 (OIR) 大鼠模型中的增生性糖尿病性视网膜病变。
Clin Exp Pharmacol Physiol. 2020 Jan;47(1):85-94. doi: 10.1111/1440-1681.13163. Epub 2019 Oct 7.
8
Increased expression and activity of 12-lipoxygenase in oxygen-induced ischemic retinopathy and proliferative diabetic retinopathy: implications in retinal neovascularization.在氧诱导的缺血性视网膜病变和增生性糖尿病性视网膜病变中,12-脂氧合酶的表达和活性增加:在视网膜新生血管形成中的意义。
Diabetes. 2011 Feb;60(2):614-24. doi: 10.2337/db10-0008. Epub 2011 Jan 12.
9
Targeting Müller cell-derived VEGF164 to reduce intravitreal neovascularization in the rat model of retinopathy of prematurity.靶向 Müller 细胞来源的 VEGF164 减少早产儿视网膜病变大鼠模型的眼内新生血管化。
Invest Ophthalmol Vis Sci. 2014 Feb 10;55(2):824-31. doi: 10.1167/iovs.13-13755.
10
IC100, a humanized therapeutic monoclonal anti-ASC antibody alleviates oxygen-induced retinopathy in mice.IC100,一种人源化的抗 ASC 治疗性单克隆抗体,可减轻氧诱导的小鼠视网膜病变。
Angiogenesis. 2024 Aug;27(3):423-440. doi: 10.1007/s10456-024-09917-9. Epub 2024 May 6.

引用本文的文献

1
AI-Driven Analysis Unveils Functional Dynamics of Müller Cells in Retinal Autoimmune Inflammation.人工智能驱动的分析揭示视网膜自身免疫性炎症中米勒细胞的功能动态。
bioRxiv. 2025 May 12:2025.02.28.640907. doi: 10.1101/2025.02.28.640907.
2
Müller cells and retinal angiogenesis: critical regulators in health and disease.米勒细胞与视网膜血管生成:健康与疾病中的关键调节因子
Front Cell Neurosci. 2024 Dec 10;18:1513686. doi: 10.3389/fncel.2024.1513686. eCollection 2024.

本文引用的文献

1
Deciphering the spatiotemporal transcriptional and chromatin accessibility of human retinal organoid development at the single-cell level.在单细胞水平上解析人类视网膜类器官发育的时空转录和染色质可及性。
iScience. 2024 Mar 4;27(4):109397. doi: 10.1016/j.isci.2024.109397. eCollection 2024 Apr 19.
2
Single-cell multiomics of the human retina reveals hierarchical transcription factor collaboration in mediating cell type-specific effects of genetic variants on gene regulation.单细胞多组学分析人类视网膜揭示了转录因子在介导遗传变异对基因调控的细胞类型特异性影响中的层次合作。
Genome Biol. 2023 Nov 27;24(1):269. doi: 10.1186/s13059-023-03111-8.
3
Polygenic regression uncovers trait-relevant cellular contexts through pathway activation transformation of single-cell RNA sequencing data.
多基因回归通过单细胞RNA测序数据的通路激活转化揭示与性状相关的细胞环境。
Cell Genom. 2023 Aug 18;3(9):100383. doi: 10.1016/j.xgen.2023.100383. eCollection 2023 Sep 13.
4
Combined Use of Anti-VEGF Drugs Before and During Pars Plana Vitrectomy for Severe Proliferative Diabetic Retinopathy.在严重增殖性糖尿病视网膜病变的玻璃体切割术前及术中联合使用抗血管内皮生长因子(VEGF)药物
Ophthalmol Ther. 2023 Dec;12(6):3133-3142. doi: 10.1007/s40123-023-00803-z. Epub 2023 Sep 15.
5
Spatial organization of the mouse retina at single cell resolution by MERFISH.通过 MERFISH 实现单细胞分辨率的小鼠视网膜空间组织。
Nat Commun. 2023 Aug 15;14(1):4929. doi: 10.1038/s41467-023-40674-3.
6
A systems biology approach uncovers novel disease mechanisms in age-related macular degeneration.一种系统生物学方法揭示了年龄相关性黄斑变性的新疾病机制。
Cell Genom. 2023 Apr 18;3(6):100302. doi: 10.1016/j.xgen.2023.100302. eCollection 2023 Jun 14.
7
A multi-omics atlas of the human retina at single-cell resolution.单细胞分辨率下的人类视网膜多组学图谱。
Cell Genom. 2023 Apr 11;3(6):100298. doi: 10.1016/j.xgen.2023.100298. eCollection 2023 Jun 14.
8
Cross-species scRNA-seq reveals the cellular landscape of retina and early alterations in type 2 diabetes mice.跨物种 scRNA-seq 揭示了视网膜的细胞图谱和 2 型糖尿病小鼠的早期变化。
Genomics. 2023 Jul;115(4):110644. doi: 10.1016/j.ygeno.2023.110644. Epub 2023 Jun 4.
9
Stress resilience-enhancing drugs preserve tissue structure and function in degenerating retina via phosphodiesterase inhibition.应激弹性增强药物通过抑制磷酸二酯酶来保护退化视网膜的组织结构和功能。
Proc Natl Acad Sci U S A. 2023 May 9;120(19):e2221045120. doi: 10.1073/pnas.2221045120. Epub 2023 May 1.
10
Activation of retinal glial cells contributes to the degeneration of ganglion cells in experimental glaucoma.视网膜神经胶质细胞的激活导致实验性青光眼中神经节细胞的退化。
Prog Retin Eye Res. 2023 Mar;93:101169. doi: 10.1016/j.preteyeres.2023.101169. Epub 2023 Feb 1.