Suppr超能文献

通过等位基因缓冲实现合理、稳健的生物振荡。

Plausible, robust biological oscillations through allelic buffering.

机构信息

Lab for Cell Dynamics, Institute of Molecular Biology, Academia Sinica, Taipei 115, Taiwan.

Niels Bohr Institute, University of Copenhagen, Copenhagen 2100, Denmark.

出版信息

Cell Syst. 2024 Nov 20;15(11):1018-1032.e12. doi: 10.1016/j.cels.2024.10.002. Epub 2024 Nov 5.

Abstract

Biological oscillators can specify time- and dose-dependent functions via dedicated control of their oscillatory dynamics. However, how biological oscillators, which recurrently activate noisy biochemical processes, achieve robust oscillations remains unclear. Here, we characterize the long-term oscillations of p53 and its negative feedback regulator Mdm2 in single cells after DNA damage. Whereas p53 oscillates regularly, Mdm2 from a single MDM2 allele exhibits random unresponsiveness to ∼9% of p53 pulses. Using allelic-specific imaging of MDM2 activity, we show that MDM2 alleles buffer each other to maintain p53 pulse amplitude. Removal of MDM2 allelic buffering cripples the robustness of p53 amplitude, thereby elevating p21 levels and cell-cycle arrest. In silico simulations support that allelic buffering enhances the robustness of biological oscillators and broadens their plausible biochemical space. Our findings show how allelic buffering ensures robust p53 oscillations, highlighting the potential importance of allelic buffering for the emergence of robust biological oscillators during evolution. A record of this paper's transparent peer review process is included in the supplemental information.

摘要

生物振荡器可以通过专门控制其振荡动力学来指定时间和剂量依赖性的功能。然而,反复激活噪声生化过程的生物振荡器如何实现稳健的振荡仍然不清楚。在这里,我们在 DNA 损伤后对单个细胞中的 p53 及其负反馈调节剂 Mdm2 的长期振荡进行了表征。尽管 p53 有规律地振荡,但来自单个 MDM2 等位基因的 Mdm2 对约 9%的 p53 脉冲表现出随机无反应性。使用 MDM2 活性的等位基因特异性成像,我们表明 MDM2 等位基因相互缓冲以维持 p53 脉冲幅度。消除 MDM2 等位基因缓冲会破坏 p53 幅度的稳健性,从而提高 p21 水平并引发细胞周期停滞。计算机模拟支持等位基因缓冲增强了生物振荡器的稳健性,并拓宽了它们可能的生化空间。我们的研究结果表明,等位基因缓冲如何确保 p53 振荡的稳健性,突出了等位基因缓冲在进化过程中产生稳健的生物振荡器中的潜在重要性。本论文的透明同行评审过程记录包含在补充信息中。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验