Zhang Lanyue, Li Yang, Deng Juexiao, Liao Wenxin, Liu Tingting, Shen Fujin
Department of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, 239 Jiefang Road, Wuchang District, Wuhan, 430060, Hubei, China.
Discov Oncol. 2024 Nov 7;15(1):626. doi: 10.1007/s12672-024-01519-7.
NEK2 is a member of the NEKs family and plays an important role in cell mitosis. Increasing evidence suggests that NEK2 is associated with the development of multiple tumors, but systematic studies of NEK2 in cancer are still lacking. Therefore, we evaluated the prognostic value of NEK2 in 33 cancers to elucidate the potential function of NEK2 in pan-cancers.
We investigated the role of NEK2 in pan-cancers utilizing The Cancer Genome Atlas (TCGA) and the Genotype-Tissue Expression (GTEx) database. Additionally, we analyzed the association between NEK2 gene expression across various cancers, protein expression, the tumor microenvironment (TME), and drug sensitivity using several software and web platforms.The potential oncogenic role of NEK2 was initially explored using bioinformatics methods. Furthermore, we conducted in vitro experiments to preliminarily validate the function of NEK2 in cervical cancer.
NEK2 is overexpressed in almost all tumors, and mutation of NEK2 are associated with a poorer tumor prognosis. In addition, the correlation between NEK2 and immune features such as immune cell infiltration, immune checkpoint genes, tumor mutational burden (TMB), Microsatellite instability(MSI) etc. suggest that NEK2 could potentially be applied in the immunotherapy of tumors.
NEK2 may be a potential pan-cancer biomarker and immunotherapeutic target for improving the efficacy of tumor therapy.
NEK2是NEKs家族的成员之一,在细胞有丝分裂中发挥重要作用。越来越多的证据表明,NEK2与多种肿瘤的发生发展相关,但目前仍缺乏对NEK2在癌症中的系统性研究。因此,我们评估了NEK2在33种癌症中的预后价值,以阐明NEK2在泛癌中的潜在功能。
我们利用癌症基因组图谱(TCGA)和基因型-组织表达(GTEx)数据库研究了NEK2在泛癌中的作用。此外,我们使用多种软件和网络平台分析了NEK2基因在不同癌症中的表达、蛋白质表达、肿瘤微环境(TME)以及药物敏感性之间的关联。最初使用生物信息学方法探索了NEK2的潜在致癌作用。此外,我们进行了体外实验,初步验证NEK2在宫颈癌中的功能。
NEK2在几乎所有肿瘤中均过度表达,且NEK2突变与较差的肿瘤预后相关。此外,NEK2与免疫细胞浸润、免疫检查点基因、肿瘤突变负荷(TMB)、微卫星不稳定性(MSI)等免疫特征之间的相关性表明,NEK2可能在肿瘤免疫治疗中具有应用潜力。
NEK2可能是一种潜在的泛癌生物标志物和免疫治疗靶点,有助于提高肿瘤治疗效果。